Cow genome map


           Conread name:
           Ss1.1-rptbr0134_l9.5
        

               Conread position:
               503-888
               

               Cow position:
               chr10:53810548-53810931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               608-810
               

               Cow position:
               chr10:39400283-39400482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               621-810
               

               Cow position:
               chr10:6565588-6565397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               13, 153
               

               Conread position:
               623-737
               

               Cow position:
               chr10:55616045-55616162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               624-798
               

               Cow position:
               chr10:66466344-66466167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               624-805
               

               Cow position:
               chr10:37244156-37244338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               633-794
               

               Cow position:
               chr10:14418039-14417877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               130, 74
               

               Conread position:
               634-813
               

               Cow position:
               chr10:27747614-27747801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               700-813
               

               Cow position:
               chr10:20931948-20931834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               
Show alignments to all cow chromosomes.