Cow genome map
| Conread name: | Ss1.1-rret01_o24.5 |
| Conread position: | 2-432 |
| Cow position: | chr14:25795480-25795047 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 124 |
| Conread position: | 4-391 |
| Cow position: | chr14:3127728-3127344 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 24 |
| Conread position: | 8-427 |
| Cow position: | chr14:25859734-25860152 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 12 |
| Conread position: | 11-337 |
| Cow position: | chr14:25836600-25836924 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 226, 9 |
| Conread position: | 15-426 |
| Cow position: | chr14:25783311-25783723 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 89 |
| Conread position: | 19-343 |
| Cow position: | chr14:25876962-25877285 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 91 |
| Conread position: | 19-422 |
| Cow position: | chr14:25836774-25837178 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 20-427 |
| Cow position: | chr14:25836103-25836511 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 253, 106 |
| Conread position: | 20-427 |
| Cow position: | chr14:25836355-25836763 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 20-427 |
| Cow position: | chr14:25859408-25859816 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 88 |
| Conread position: | 20-427 |
| Cow position: | chr14:25876879-25877287 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 91 |
| Conread position: | 23-258 |
| Cow position: | chr14:25911058-25911292 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 23-392 |
| Cow position: | chr14:25859999-25860367 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 177, 103 |
| Conread position: | 23-422 |
| Cow position: | chr14:25877050-25877451 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 23-469 |
| Cow position: | chr14:25859915-25860366 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 27-339 |
| Cow position: | chr14:25794783-25794472 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 158, 99 |
| Conread position: | 27-424 |
| Cow position: | chr14:25783911-25784309 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 27-424 |
| Cow position: | chr14:25784247-25784645 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 28-424 |
| Cow position: | chr14:25783576-25783973 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 245, 98 |
| Conread position: | 28-424 |
| Cow position: | chr14:25794866-25794469 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 28-427 |
| Cow position: | chr14:25794698-25794297 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 257, 98 |
| Conread position: | 29-343 |
| Cow position: | chr14:3155474-3155787 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 29-422 |
| Cow position: | chr14:25836532-25836926 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 29-446 |
| Cow position: | chr14:25795033-25794615 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 160, 87 |
| Conread position: | 34-427 |
| Cow position: | chr14:25876725-25877119 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 35-427 |
| Cow position: | chr14:25877314-25877707 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 35-441 |
| Cow position: | chr14:25860263-25860670 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 36-337 |
| Cow position: | chr14:3127782-3127482 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 41-441 |
| Cow position: | chr14:25876564-25876965 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 69 |
| Conread position: | 45-422 |
| Cow position: | chr14:25835960-25836338 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 50-422 |
| Cow position: | chr14:25836049-25836422 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 295, 76 |
Show alignments to all cow chromosomes.