Cow genome map


           Conread name:
           Ss1.1-rret01_o24.5
        

               Conread position:
               5-337
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               256, 17
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               316, 118
               

               Conread position:
               10-256
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               207, 108
               

               Conread position:
               16-427
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               338, 101
               

               Conread position:
               27-339
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               27-381
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               158, 99
               

               Conread position:
               27-424
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               333, 97
               

               Conread position:
               27-444
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               27-542
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 84
               

               Conread position:
               28-343
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               240, 96
               

               Conread position:
               28-422
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               320, 96
               

               Conread position:
               28-422
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               28-423
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               214, 98
               

               Conread position:
               28-424
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               317, 98
               

               Conread position:
               29-342
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               34-423
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               258
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               227, 83
               

               Conread position:
               34-423
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               249, 83
               

               Conread position:
               34-426
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               239, 83
               

               Conread position:
               34-447
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               34-447
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               38-423
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               305, 88
               

               Conread position:
               40-391
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               282, 86
               

               Conread position:
               41-514
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 83
               

               Conread position:
               102-343
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               170, 22
               
Show alignments to all cow chromosomes.