Cow genome map

Conread name: Ss1.1-rret01_o24.5

Conread position: 1-443
Cow position:
Alignm length: 450
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 23

Conread position: 8-423
Cow position:
Alignm length: 418
Alignm identity: 257
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 386, 10

Conread position: 10-423
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 115

Conread position: 16-260
Cow position:
Alignm length: 245
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 16-422
Cow position:
Alignm length: 409
Alignm identity: 258
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 337, 101

Conread position: 16-427
Cow position:
Alignm length: 415
Alignm identity: 251
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 182, 110

Conread position: 16-431
Cow position:
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 101

Conread position: 16-469
Cow position:
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 101

Conread position: 17-422
Cow position:
Alignm length: 409
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 361, 101

Conread position: 17-424
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 100

Conread position: 17-430
Cow position:
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 25

Conread position: 25-407
Cow position:
Alignm length: 388
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 236, 99

Conread position: 27-385
Cow position:
Alignm length: 361
Alignm identity: 228
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 149, 57

Conread position: 27-426
Cow position:
Alignm length: 407
Alignm identity: 258
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 68, 81

Conread position: 27-427
Cow position:
Alignm length: 407
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 87

Conread position: 28-381
Cow position:
Alignm length: 355
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 167, 98

Conread position: 28-392
Cow position:
Alignm length: 367
Alignm identity: 227
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 232, 96

Conread position: 28-416
Cow position:
Alignm length: 393
Alignm identity: 243
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 321, 89

Conread position: 28-421
Cow position:
Alignm length: 397
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 88

Conread position: 28-424
Cow position:
Alignm length: 402
Alignm identity: 253
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 249, 89

Conread position: 28-424
Cow position:
Alignm length: 405
Alignm identity: 251
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 148, 98

Conread position: 28-424
Cow position:
Alignm length: 402
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 89

Conread position: 28-424
Cow position:
Alignm length: 402
Alignm identity: 253
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 77

Conread position: 28-425
Cow position:
Alignm length: 402
Alignm identity: 243
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 232, 89

Conread position: 28-426
Cow position:
Alignm length: 403
Alignm identity: 256
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 317, 98

Conread position: 28-427
Cow position:
Alignm length: 405
Alignm identity: 255
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 253, 89

Conread position: 29-422
Cow position:
Alignm length: 402
Alignm identity: 257
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 80

Conread position: 29-422
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 88

Conread position: 29-422
Cow position:
Alignm length: 399
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 297, 97

Conread position: 29-422
Cow position:
Alignm length: 398
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 79

Conread position: 29-422
Cow position:
Alignm length: 397
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 326, 97

Conread position: 29-424
Cow position:
Alignm length: 401
Alignm identity: 249
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 214, 97

Conread position: 33-422
Cow position:
Alignm length: 395
Alignm identity: 242
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 295, 93

Conread position: 33-442
Cow position:
Alignm length: 413
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 93

Conread position: 34-330
Cow position:
Alignm length: 299
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 206, 92

Conread position: 34-381
Cow position:
Alignm length: 351
Alignm identity: 220
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 208, 92

Conread position: 34-422
Cow position:
Alignm length: 392
Alignm identity: 237
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 320, 92

Conread position: 34-427
Cow position:
Alignm length: 398
Alignm identity: 258
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 66, 76

Conread position: 35-310
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 257, 91

Conread position: 35-423
Cow position:
Alignm length: 391
Alignm identity: 242
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 296, 91

Conread position: 35-431
Cow position:
Alignm length: 399
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 91

Conread position: 35-442
Cow position:
Alignm length: 411
Alignm identity: 247
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 293, 91

Conread position: 38-422
Cow position:
Alignm length: 392
Alignm identity: 241
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 76

Conread position: 41-422
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 73

Conread position: 44-426
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 22

Conread position: 49-422
Cow position:
Alignm length: 379
Alignm identity: 231
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 129, 77

Conread position: 116-424
Cow position:
Alignm length: 313
Alignm identity: 198
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 65

Conread position: 122-392
Cow position:
Alignm length: 271
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 128-424
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 71, 66

Conread position: 132-427
Cow position:
Alignm length: 301
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 126

Show alignments to all cow chromosomes.