Cow genome map

Conread name: Ss1.1-rret01_o24.5

Conread position: 1-336
Cow position:
Alignm length: 343
Alignm identity: 216
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 27

Conread position: 1-422
Cow position:
Alignm length: 429
Alignm identity: 261
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 102

Conread position: 1-422
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 123

Conread position: 2-548
Cow position:
Alignm length: 555
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 6

Conread position: 3-430
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 114

Conread position: 7-422
Cow position:
Alignm length: 421
Alignm identity: 259
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 169, 16

Conread position: 9-422
Cow position:
Alignm length: 419
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 9

Conread position: 11-334
Cow position:
Alignm length: 325
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 320, 7

Conread position: 13-441
Cow position:
Alignm length: 434
Alignm identity: 266
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 247, 104

Conread position: 16-422
Cow position:
Alignm length: 411
Alignm identity: 263
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 360, 101

Conread position: 16-423
Cow position:
Alignm length: 411
Alignm identity: 269
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 7

Conread position: 17-309
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 74

Conread position: 17-320
Cow position:
Alignm length: 304
Alignm identity: 197
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 17-418
Cow position:
Alignm length: 404
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 107

Conread position: 17-426
Cow position:
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 88

Conread position: 18-442
Cow position:
Alignm length: 428
Alignm identity: 265
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 224, 12

Conread position: 23-421
Cow position:
Alignm length: 401
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 101

Conread position: 24-425
Cow position:
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 102

Conread position: 26-428
Cow position:
Alignm length: 407
Alignm identity: 247
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 150, 100

Conread position: 27-339
Cow position:
Alignm length: 315
Alignm identity: 200
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 229, 99

Conread position: 27-343
Cow position:
Alignm length: 318
Alignm identity: 203
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 149, 98

Conread position: 27-422
Cow position:
Alignm length: 400
Alignm identity: 247
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 318, 99

Conread position: 27-422
Cow position:
Alignm length: 400
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 237, 90

Conread position: 27-423
Cow position:
Alignm length: 403
Alignm identity: 250
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 67, 77

Conread position: 27-427
Cow position:
Alignm length: 405
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 321, 97

Conread position: 27-431
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 82

Conread position: 27-443
Cow position:
Alignm length: 421
Alignm identity: 258
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 66, 81

Conread position: 28-339
Cow position:
Alignm length: 315
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 79

Conread position: 28-427
Cow position:
Alignm length: 406
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 109

Conread position: 28-443
Cow position:
Alignm length: 419
Alignm identity: 248
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 318, 89

Conread position: 28-484
Cow position:
Alignm length: 463
Alignm identity: 293
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 339, 98

Conread position: 29-340
Cow position:
Alignm length: 312
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 29-346
Cow position:
Alignm length: 319
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 85

Conread position: 29-397
Cow position:
Alignm length: 371
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 263, 88

Conread position: 29-401
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 97

Conread position: 29-404
Cow position:
Alignm length: 378
Alignm identity: 235
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 293, 97

Conread position: 29-422
Cow position:
Alignm length: 399
Alignm identity: 247
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 17

Conread position: 29-422
Cow position:
Alignm length: 396
Alignm identity: 237
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 341, 97

Conread position: 29-422
Cow position:
Alignm length: 397
Alignm identity: 242
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 239, 97

Conread position: 29-423
Cow position:
Alignm length: 400
Alignm identity: 248
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 302, 87

Conread position: 29-424
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 29-427
Cow position:
Alignm length: 401
Alignm identity: 247
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 369, 97

Conread position: 29-428
Cow position:
Alignm length: 408
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 81

Conread position: 29-431
Cow position:
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 80

Conread position: 29-548
Cow position:
Alignm length: 526
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 95

Conread position: 34-422
Cow position:
Alignm length: 394
Alignm identity: 246
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 71

Conread position: 35-441
Cow position:
Alignm length: 411
Alignm identity: 246
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 70

Conread position: 37-339
Cow position:
Alignm length: 303
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 37-427
Cow position:
Alignm length: 395
Alignm identity: 237
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 284, 87

Conread position: 41-422
Cow position:
Alignm length: 388
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 64

Conread position: 43-422
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 311, 83

Conread position: 46-427
Cow position:
Alignm length: 388
Alignm identity: 238
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 65

Conread position: 47-422
Cow position:
Alignm length: 383
Alignm identity: 238
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 61

Conread position: 65-413
Cow position:
Alignm length: 352
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 302, 61

Conread position: 137-427
Cow position:
Alignm length: 296
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 213, 224

Conread position: 138-427
Cow position:
Alignm length: 294
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 210, 218

Conread position: 147-431
Cow position:
Alignm length: 288
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 247, 0

Show alignments to all cow chromosomes.