Cow genome map
| Conread name: | Ss1.1-rret01_o24.5 |
| Conread position: | 25-257 |
| Cow position: | chr28:7758063-7758294 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 25-417 |
| Cow position: | chr28:9298627-9299016 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 320, 39 |
| Conread position: | 27-423 |
| Cow position: | chr28:7757477-7757873 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 92, 111 |
| Conread position: | 28-259 |
| Cow position: | chr28:9253333-9253563 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 28-339 |
| Cow position: | chr28:9253249-9253559 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 28-343 |
| Cow position: | chr28:9290314-9290626 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 294, 61 |
| Conread position: | 28-405 |
| Cow position: | chr28:7810569-7810947 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 275, 96 |
| Conread position: | 28-417 |
| Cow position: | chr28:7810410-7810791 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 110 |
| Conread position: | 28-422 |
| Cow position: | chr28:7757562-7757957 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 317, 88 |
| Conread position: | 28-422 |
| Cow position: | chr28:7757898-7758293 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 29-339 |
| Cow position: | chr28:7758387-7758696 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 29-422 |
| Cow position: | chr28:9253082-9253476 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 29-422 |
| Cow position: | chr28:9290151-9290539 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 34-423 |
| Cow position: | chr28:7757652-7758042 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 288, 90 |
| Conread position: | 46-339 |
| Cow position: | chr28:9299217-9299509 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 120-260 |
| Cow position: | chr28:34679320-34679180 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.