Cow genome map


           Conread name:
           Ss1.1-rret01_o24.5
        

               Conread position:
               1-321
               

               Cow position:
               chr4:42314246-42313927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               184, 125
               

               Conread position:
               2-422
               

               Cow position:
               chr4:42314664-42314244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               111, 38
               

               Conread position:
               23-421
               

               Cow position:
               chr4:42314476-42314077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               168, 103
               

               Conread position:
               23-423
               

               Cow position:
               chr4:42314979-42314580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               28-422
               

               Cow position:
               chr4:42315308-42314915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 25
               

               Conread position:
               30-425
               

               Cow position:
               chr4:42315140-42314744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               168, 96
               

               Conread position:
               35-426
               

               Cow position:
               chr4:42314128-42313741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 79
               
Show alignments to all cow chromosomes.