Cow genome map

Conread name: Ss1.1-rret01_o24.5

Conread position: 5-343
Cow position: chr8:45201563-45201898 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 13

Conread position: 5-422
Cow position: chr8:45200807-45201223 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 255
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 120, 12

Conread position: 20-337
Cow position: chr8:46816267-46816583 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 258, 106

Conread position: 25-422
Cow position: chr8:45201245-45201643 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 253
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 156, 99

Conread position: 27-416
Cow position: chr8:55581303-55581693 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 253
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 264, 99

Conread position: 27-427
Cow position: chr8:48407401-48407000 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 246
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 111

Conread position: 28-339
Cow position: chr8:48407148-48406838 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 198
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 28-343
Cow position: chr8:45201416-45201730 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 197
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 109

Conread position: 28-392
Cow position: chr8:48407568-48407205 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 221
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 28-423
Cow position: chr8:45201080-45201476 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 247
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 147, 96

Conread position: 28-424
Cow position: chr8:48407484-48407087 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 245
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 80

Conread position: 28-424
Cow position: chr8:55581220-55581617 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 243
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 239, 89

Conread position: 28-427
Cow position: chr8:46816191-46816591 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 255
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 86

Conread position: 28-442
Cow position: chr8:48407316-48406901 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 265
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 317, 96

Conread position: 29-422
Cow position: chr8:46816108-46816502 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 254
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 205, 89

Conread position: 29-422
Cow position: chr8:55580885-55581279 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 238
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 365, 95

Conread position: 35-257
Cow position: chr8:46817038-46817259 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 35-423
Cow position: chr8:46816618-46817007 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 55

Conread position: 38-422
Cow position: chr8:46816369-46816754 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 67

Conread position: 41-422
Cow position: chr8:45201009-45201391 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 5

Conread position: 41-424
Cow position: chr8:46816960-46817344 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 238
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 66

Conread position: 41-424
Cow position: chr8:55580981-55581365 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 353, 85

Conread position: 41-446
Cow position: chr8:46816036-46816442 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 245
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 67

Conread position: 41-490
Cow position: chr8:46816540-46816992 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 287
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 67

Conread position: 49-422
Cow position: chr8:48407631-48407257 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 31

Conread position: 50-392
Cow position: chr8:48406706-48406365 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 43

Show alignments to all cow chromosomes.