Cow genome map
| Conread name: | Ss1.1-rret01_o24.5 |
| Conread position: | 2-427 |
| Cow position: | chrX:25325465-25325041 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 273, 24 |
| Conread position: | 14-400 |
| Cow position: | chrX:25310190-25310577 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 105, 80 |
| Conread position: | 20-425 |
| Cow position: | chrX:25325113-25324707 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 346, 97 |
| Conread position: | 26-423 |
| Cow position: | chrX:25309698-25310096 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 28-230 |
| Cow position: | chrX:29044862-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 28-259 |
| Cow position: | chrX:29044946-29044716 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 74 |
| Conread position: | 28-339 |
| Cow position: | chrX:12627753-12628061 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 28-392 |
| Cow position: | chrX:29045030-29044667 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 245, 89 |
| Conread position: | 28-422 |
| Cow position: | chrX:12627333-12627726 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 28-422 |
| Cow position: | chrX:25309952-25310347 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 110 |
| Conread position: | 28-422 |
| Cow position: | chrX:25325021-25324626 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 245, 96 |
| Conread position: | 28-423 |
| Cow position: | chrX:12627667-12628063 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 183, 89 |
| Conread position: | 28-423 |
| Cow position: | chrX:25309784-25310180 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 253, 96 |
| Conread position: | 28-425 |
| Cow position: | chrX:25324769-25324371 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 370, 98 |
| Conread position: | 28-425 |
| Cow position: | chrX:25325189-25324791 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 76, 86 |
| Conread position: | 28-426 |
| Cow position: | chrX:25325525-25325126 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 29-422 |
| Cow position: | chrX:25310037-25310431 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 34-319 |
| Cow position: | chrX:25310294-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 35-422 |
| Cow position: | chrX:29045107-29044719 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 41-417 |
| Cow position: | chrX:25309881-25310258 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 157, 83 |
| Conread position: | 41-422 |
| Cow position: | chrX:25324840-25324458 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 66 |
Show alignments to all cow chromosomes.