Cow genome map


           Conread name:
           Ss1.1-rret22_a12.5
        

               Conread position:
               512-660
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               517-680
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               531-680
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 130
               

               Conread position:
               533-679
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               534-680
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               534-680
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               536-680
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               537-680
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               539-680
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               545-680
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               545-680
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               547-680
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               547-680
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               548-675
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               548-680
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               35, 83
               

               Conread position:
               548-728
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               549-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 112
               

               Conread position:
               549-680
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 39
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               550-683
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 104
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               552-678
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               552-679
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               554-679
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               555-679
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               555-680
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               558-680
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               559-680
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               559-680
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               559-680
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               560-680
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.