Cow genome map

Conread name: Ss1.1-rret22_a12.5

Conread position: 512-660
Cow position: chr13:15061745-15061592 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 35

Conread position: 517-680
Cow position: chr13:57322901-57323065 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 28

Conread position: 531-680
Cow position: chr13:25313389-25313230 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 130

Conread position: 533-679
Cow position: chr13:25061948-25062094 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 91

Conread position: 534-680
Cow position: chr13:19393060-19393211 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 534-680
Cow position: chr13:37405479-37405630 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 34

Conread position: 536-680
Cow position: chr13:54582644-54582793 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 9

Conread position: 537-680
Cow position: chr13:18058478-18058331 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 107

Conread position: 539-680
Cow position: chr13:47651643-47651497 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 19

Conread position: 545-680
Cow position: chr13:20440838-20440694 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 545-680
Cow position: chr13:37614421-37614277 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 546-680
Cow position: chr13:37555093-37554954 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 102

Conread position: 546-680
Cow position: chr13:53619778-53619923 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 547-680
Cow position: chr13:6189821-6189681 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 547-680
Cow position: chr13:14063741-14063602 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 13

Conread position: 548-675
Cow position: chr13:54701961-54702095 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 548-680
Cow position: chr13:52477865-52477727 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 35, 83

Conread position: 548-728
Cow position: chr13:30809594-30809409 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 12

Conread position: 549-680
Cow position: chr13:20534681-20534815 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 112

Conread position: 549-680
Cow position: chr13:23478681-23478821 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 550-680
Cow position: chr13:11231515-11231375 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 550-680
Cow position: chr13:18491389-18491515 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 550-680
Cow position: chr13:28439198-28439328 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 39

Conread position: 550-680
Cow position: chr13:60375706-60375566 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 550-683
Cow position: chr13:46330157-46330014 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr13:13320580-13320716 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr13:17815027-17815157 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 104

Conread position: 551-680
Cow position: chr13:23667040-23667172 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 551-680
Cow position: chr13:25817312-25817446 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 86

Conread position: 551-680
Cow position: chr13:41806559-41806691 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 552-678
Cow position: chr13:42200404-42200536 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 77

Conread position: 552-679
Cow position: chr13:51528654-51528520 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 43

Conread position: 552-680
Cow position: chr13:14782132-14782261 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 552-680
Cow position: chr13:21170312-21170445 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 82

Conread position: 552-680
Cow position: chr13:33854897-33854765 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 552-680
Cow position: chr13:38035623-38035757 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 88

Conread position: 552-680
Cow position: chr13:45073462-45073335 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 78

Conread position: 553-680
Cow position: chr13:1462506-1462373 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 9

Conread position: 553-680
Cow position: chr13:21981185-21981055 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 79

Conread position: 553-680
Cow position: chr13:41474660-41474791 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 554-679
Cow position: chr13:21288299-21288167 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 555-679
Cow position: chr13:27198701-27198826 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 75

Conread position: 555-680
Cow position: chr13:19007730-19007854 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 558-680
Cow position: chr13:55494729-55494607 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 79

Conread position: 559-680
Cow position: chr13:15257576-15257448 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 559-680
Cow position: chr13:15289128-15289002 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 75

Conread position: 559-680
Cow position: chr13:20784385-20784509 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 77

Conread position: 560-680
Cow position: chr13:23399558-23399685 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.