Cow genome map
Conread name: | Ss1.1-rret22_a12.5 |
Conread position: | 512-660 |
Cow position: | chr13:15061745-15061592 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 5, 35 |
Conread position: | 517-680 |
Cow position: | chr13:57322901-57323065 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 128 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 69, 28 |
Conread position: | 531-680 |
Cow position: | chr13:25313389-25313230 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 30, 130 |
Conread position: | 533-679 |
Cow position: | chr13:25061948-25062094 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 47, 91 |
Conread position: | 534-680 |
Cow position: | chr13:19393060-19393211 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 534-680 |
Cow position: | chr13:37405479-37405630 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 17, 34 |
Conread position: | 536-680 |
Cow position: | chr13:54582644-54582793 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 47, 9 |
Conread position: | 537-680 |
Cow position: | chr13:18058478-18058331 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 47, 107 |
Conread position: | 539-680 |
Cow position: | chr13:47651643-47651497 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 47, 19 |
Conread position: | 545-680 |
Cow position: | chr13:20440838-20440694 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 545-680 |
Cow position: | chr13:37614421-37614277 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 546-680 |
Cow position: | chr13:37555093-37554954 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 119 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 39, 102 |
Conread position: | 546-680 |
Cow position: | chr13:53619778-53619923 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 547-680 |
Cow position: | chr13:6189821-6189681 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 547-680 |
Cow position: | chr13:14063741-14063602 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 115 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 548-675 |
Cow position: | chr13:54701961-54702095 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 548-680 |
Cow position: | chr13:52477865-52477727 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 35, 83 |
Conread position: | 548-728 |
Cow position: | chr13:30809594-30809409 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 37, 12 |
Conread position: | 549-680 |
Cow position: | chr13:20534681-20534815 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 47, 112 |
Conread position: | 549-680 |
Cow position: | chr13:23478681-23478821 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 550-680 |
Cow position: | chr13:11231515-11231375 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 550-680 |
Cow position: | chr13:18491389-18491515 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 550-680 |
Cow position: | chr13:28439198-28439328 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 80, 39 |
Conread position: | 550-680 |
Cow position: | chr13:60375706-60375566 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 550-683 |
Cow position: | chr13:46330157-46330014 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 551-680 |
Cow position: | chr13:13320580-13320716 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 551-680 |
Cow position: | chr13:17815027-17815157 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 35, 104 |
Conread position: | 551-680 |
Cow position: | chr13:23667040-23667172 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 551-680 |
Cow position: | chr13:25817312-25817446 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 35, 86 |
Conread position: | 551-680 |
Cow position: | chr13:41806559-41806691 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 552-678 |
Cow position: | chr13:42200404-42200536 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 34, 77 |
Conread position: | 552-679 |
Cow position: | chr13:51528654-51528520 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 78, 43 |
Conread position: | 552-680 |
Cow position: | chr13:14782132-14782261 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 34, 78 |
Conread position: | 552-680 |
Cow position: | chr13:21170312-21170445 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 34, 82 |
Conread position: | 552-680 |
Cow position: | chr13:33854897-33854765 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 552-680 |
Cow position: | chr13:38035623-38035757 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 88 |
Conread position: | 552-680 |
Cow position: | chr13:45073462-45073335 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 110 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 44, 78 |
Conread position: | 553-680 |
Cow position: | chr13:1462506-1462373 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 553-680 |
Cow position: | chr13:21981185-21981055 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 33, 79 |
Conread position: | 553-680 |
Cow position: | chr13:41474660-41474791 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 554-679 |
Cow position: | chr13:21288299-21288167 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 555-679 |
Cow position: | chr13:27198701-27198826 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 38, 75 |
Conread position: | 555-680 |
Cow position: | chr13:19007730-19007854 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 558-680 |
Cow position: | chr13:55494729-55494607 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 105 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 38, 79 |
Conread position: | 559-680 |
Cow position: | chr13:15257576-15257448 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 559-680 |
Cow position: | chr13:15289128-15289002 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 75 |
Conread position: | 559-680 |
Cow position: | chr13:20784385-20784509 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 27, 77 |
Conread position: | 560-680 |
Cow position: | chr13:23399558-23399685 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.