Cow genome map
| Conread name: | Ss1.1-rret22_a12.5 |
| Conread position: | 487-680 |
| Cow position: | chr15:47844261-47844070 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 493-664 |
| Cow position: | chr15:30983962-30983795 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 139, 49 |
| Conread position: | 495-680 |
| Cow position: | chr15:21903579-21903387 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 525-680 |
| Cow position: | chr15:27976013-27975848 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 532-680 |
| Cow position: | chr15:2931700-2931544 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 536-673 |
| Cow position: | chr15:16492325-16492471 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 536-678 |
| Cow position: | chr15:19002413-19002259 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 537-681 |
| Cow position: | chr15:14505315-14505457 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 539-679 |
| Cow position: | chr15:13513408-13513554 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 539-680 |
| Cow position: | chr15:9128794-9128648 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 546-680 |
| Cow position: | chr15:8331317-8331179 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 546-680 |
| Cow position: | chr15:41475946-41475807 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 547-680 |
| Cow position: | chr15:47920265-47920127 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 548-680 |
| Cow position: | chr15:34223750-34223889 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 550-662 |
| Cow position: | chr15:13612479-13612590 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 551-678 |
| Cow position: | chr15:22553655-22553520 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 551-680 |
| Cow position: | chr15:26158713-26158573 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 551-680 |
| Cow position: | chr15:26849646-26849514 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 551-680 |
| Cow position: | chr15:28098998-28099135 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 551-680 |
| Cow position: | chr15:36353552-36353691 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 552-678 |
| Cow position: | chr15:25208872-25208736 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 553-680 |
| Cow position: | chr15:11909059-11908923 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 553-680 |
| Cow position: | chr15:14576219-14576351 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 554-680 |
| Cow position: | chr15:848536-848666 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 554-680 |
| Cow position: | chr15:51558293-51558425 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 555-682 |
| Cow position: | chr15:36846297-36846158 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 558-680 |
| Cow position: | chr15:244675-244804 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.