Cow genome map
| Conread name: | Ss1.1-rret22_a12.5 |
| Conread position: | 510-707 |
| Cow position: | chr20:21169481-21169679 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 124 |
| Conread position: | 533-680 |
| Cow position: | chr20:18379639-18379487 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 536-692 |
| Cow position: | chr20:15548631-15548791 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 98 |
| Conread position: | 538-681 |
| Cow position: | chr20:12581697-12581846 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 540-680 |
| Cow position: | chr20:6240263-6240412 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 548-680 |
| Cow position: | chr20:23846417-23846555 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 550-680 |
| Cow position: | chr20:12420372-12420510 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 551-671 |
| Cow position: | chr20:27407649-27407775 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 551-680 |
| Cow position: | chr20:3599156-3599291 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 551-680 |
| Cow position: | chr20:14980261-14980396 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 551-681 |
| Cow position: | chr20:13805562-13805429 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 552-680 |
| Cow position: | chr20:34881158-34881288 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 553-679 |
| Cow position: | chr20:7756393-7756515 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 553-680 |
| Cow position: | chr20:10209051-10208918 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 554-680 |
| Cow position: | chr20:7737991-7738122 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 555-680 |
| Cow position: | chr20:4891876-4892010 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 555-680 |
| Cow position: | chr20:15530102-15529969 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 556-680 |
| Cow position: | chr20:17515400-17515525 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 556-680 |
| Cow position: | chr20:24070043-24069915 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 100 |
Show alignments to all cow chromosomes.