Cow genome map

Conread name: Ss1.1-rret22_a12.5

Conread position: 519-678
Cow position: chr23:1510692-1510856 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 15

Conread position: 530-671
Cow position: chr23:7155473-7155622 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 100

Conread position: 535-679
Cow position: chr23:2281966-2282112 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 118

Conread position: 535-680
Cow position: chr23:4505036-4504880 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 83

Conread position: 538-680
Cow position: chr23:12363400-12363549 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 538-680
Cow position: chr23:25968636-25968489 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 103

Conread position: 546-680
Cow position: chr23:16564274-16564137 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 96

Conread position: 546-681
Cow position: chr23:2801220-2801362 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 547-678
Cow position: chr23:24718593-24718731 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 548-680
Cow position: chr23:19565655-19565518 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 549-680
Cow position: chr23:27849202-27849065 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 549-699
Cow position: chr23:2016860-2017019 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 111

Conread position: 550-680
Cow position: chr23:18417283-18417161 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 551-678
Cow position: chr23:4979077-4979212 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 101

Conread position: 551-678
Cow position: chr23:20725485-20725617 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 95

Conread position: 551-680
Cow position: chr23:534432-534296 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr23:1981467-1981593 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 79

Conread position: 551-680
Cow position: chr23:2511351-2511214 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 551-680
Cow position: chr23:17597628-17597495 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 82

Conread position: 552-673
Cow position: chr23:308413-308539 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 58

Conread position: 552-680
Cow position: chr23:15056371-15056503 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 88

Conread position: 554-680
Cow position: chr23:40275354-40275479 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 555-678
Cow position: chr23:22238617-22238751 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 555-680
Cow position: chr23:26986070-26986203 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 31

Conread position: 555-680
Cow position: chr23:40995365-40995239 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 68

Conread position: 558-678
Cow position: chr23:7845487-7845364 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 79

Conread position: 559-680
Cow position: chr23:10497894-10497766 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 72

Show alignments to all cow chromosomes.