Cow genome map
| Conread name: | Ss1.1-rret22_a12.5 |
| Conread position: | 530-680 |
| Cow position: | chr25:7864551-7864397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 531-680 |
| Cow position: | chr25:2415014-2414861 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 536-678 |
| Cow position: | chr25:7750661-7750518 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 536-681 |
| Cow position: | chr25:7551152-7551304 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 538-680 |
| Cow position: | chr25:26679441-26679290 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 539-676 |
| Cow position: | chr25:14791966-14791822 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 539-678 |
| Cow position: | chr25:24115100-24115250 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 539-680 |
| Cow position: | chr25:7684686-7684836 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 544-680 |
| Cow position: | chr25:18288560-18288705 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 546-678 |
| Cow position: | chr25:35762795-35762653 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 546-680 |
| Cow position: | chr25:17141310-17141166 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 547-680 |
| Cow position: | chr25:28667845-28667982 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 548-680 |
| Cow position: | chr25:15999347-15999488 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 549-680 |
| Cow position: | chr25:9025326-9025186 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 549-680 |
| Cow position: | chr25:13470509-13470650 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 550-676 |
| Cow position: | chr25:15573580-15573456 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 45 |
| Conread position: | 550-679 |
| Cow position: | chr25:41150762-41150901 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 550-680 |
| Cow position: | chr25:13272771-13272633 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 551-673 |
| Cow position: | chr25:37022291-37022417 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 551-678 |
| Cow position: | chr25:33557467-33557332 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 551-680 |
| Cow position: | chr25:23769696-23769823 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 551-680 |
| Cow position: | chr25:33550712-33550575 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 552-675 |
| Cow position: | chr25:15349709-15349839 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 552-677 |
| Cow position: | chr25:24669252-24669382 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 553-680 |
| Cow position: | chr25:9573936-9574070 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 554-680 |
| Cow position: | chr25:4157049-4157182 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 555-680 |
| Cow position: | chr25:4521644-4521777 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 556-678 |
| Cow position: | chr25:31657084-31657211 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 558-680 |
| Cow position: | chr25:26072369-26072497 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 90 |
Show alignments to all cow chromosomes.