Cow genome map
| Conread name: | Ss1.1-rret22_a12.5 |
| Conread position: | 538-680 |
| Cow position: | chr29:31929200-31929051 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 539-680 |
| Cow position: | chr29:17110166-17110021 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 546-678 |
| Cow position: | chr29:19949512-19949373 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 546-680 |
| Cow position: | chr29:9378842-9378701 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 546-680 |
| Cow position: | chr29:22028753-22028891 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 87 |
| Conread position: | 547-668 |
| Cow position: | chr29:34919256-34919383 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 547-679 |
| Cow position: | chr29:9709899-9709760 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 547-680 |
| Cow position: | chr29:10839145-10839005 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 550-680 |
| Cow position: | chr29:36781107-36781240 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 550-695 |
| Cow position: | chr29:7443864-7444012 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 551-678 |
| Cow position: | chr29:19762465-19762334 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 551-680 |
| Cow position: | chr29:7414696-7414566 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 551-680 |
| Cow position: | chr29:25737218-25737350 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 552-680 |
| Cow position: | chr29:4070821-4070688 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 552-680 |
| Cow position: | chr29:19363909-19363774 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 552-680 |
| Cow position: | chr29:24624442-24624312 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 553-672 |
| Cow position: | chr29:659481-659354 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 555-679 |
| Cow position: | chr29:36697955-36697822 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 555-680 |
| Cow position: | chr29:12890874-12890746 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 555-680 |
| Cow position: | chr29:36357326-36357190 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 556-680 |
| Cow position: | chr29:28066677-28066551 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 558-675 |
| Cow position: | chr29:29645129-29645246 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 37 |
Show alignments to all cow chromosomes.