Cow genome map


           Conread name:
           Ss1.1-rret22_a12.5
        

               Conread position:
               494-680
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               514-677
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               524-679
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               533-680
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               536-680
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               537-680
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               538-680
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               539-680
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               539-711
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               540-680
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               546-662
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               548-678
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               548-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               549-678
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               549-678
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               549-679
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               549-680
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               549-680
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               549-681
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               551-669
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               551-679
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               551-679
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               552-678
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               553-681
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               553-684
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               554-678
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               554-683
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               554-697
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 60
               

               Conread position:
               555-680
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               555-680
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               555-680
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               559-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               559-680
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               559-680
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               559-681
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               37, 73
               
Show alignments to all cow chromosomes.