Cow genome map
| Conread name: | Ss1.1-rret22_a12.5 |
| Conread position: | 516-680 |
| Cow position: | chr7:63707036-63707209 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 523-678 |
| Cow position: | chr7:23672025-23671862 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 524-680 |
| Cow position: | chr7:2738954-2739123 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 527-676 |
| Cow position: | chr7:17750574-17750730 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 535-680 |
| Cow position: | chr7:51910369-51910229 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 536-678 |
| Cow position: | chr7:12494860-12495010 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 538-680 |
| Cow position: | chr7:36996616-36996470 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 125 |
| Conread position: | 546-678 |
| Cow position: | chr7:11958193-11958329 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 546-679 |
| Cow position: | chr7:6043887-6044027 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 546-680 |
| Cow position: | chr7:26263405-26263543 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 546-680 |
| Cow position: | chr7:31497946-31497818 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 546-680 |
| Cow position: | chr7:46818250-46818386 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 546-680 |
| Cow position: | chr7:48721655-48721797 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 547-680 |
| Cow position: | chr7:20180951-20181090 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 548-680 |
| Cow position: | chr7:8089410-8089273 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 549-675 |
| Cow position: | chr7:50860243-50860120 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 550-680 |
| Cow position: | chr7:53211456-53211326 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 551-680 |
| Cow position: | chr7:4765084-4764953 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 551-680 |
| Cow position: | chr7:11960636-11960504 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 551-680 |
| Cow position: | chr7:23205383-23205519 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 551-680 |
| Cow position: | chr7:30931738-30931869 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 551-680 |
| Cow position: | chr7:32259952-32260087 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 553-662 |
| Cow position: | chr7:34098844-34098727 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 553-680 |
| Cow position: | chr7:23819135-23819003 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 553-680 |
| Cow position: | chr7:37394543-37394406 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 553-680 |
| Cow position: | chr7:59688779-59688646 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 555-680 |
| Cow position: | chr7:15570278-15570146 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 555-680 |
| Cow position: | chr7:31170718-31170847 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 555-680 |
| Cow position: | chr7:47513445-47513577 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 556-679 |
| Cow position: | chr7:10414900-10415025 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 559-680 |
| Cow position: | chr7:25087479-25087355 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 76 |
Show alignments to all cow chromosomes.