Cow genome map

Conread name: Ss1.1-rret22_a12.5

Conread position: 481-691
Cow position: chr9:28726975-28726758 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 199

Conread position: 522-680
Cow position: chr9:33584888-33584722 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 533-678
Cow position: chr9:7543451-7543302 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 111

Conread position: 535-680
Cow position: chr9:45141786-45141637 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 91

Conread position: 536-680
Cow position: chr9:6192647-6192497 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 112

Conread position: 536-680
Cow position: chr9:41728072-41728223 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 7

Conread position: 545-680
Cow position: chr9:40984324-40984468 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 546-663
Cow position: chr9:61637256-61637373 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 86

Conread position: 546-672
Cow position: chr9:4241228-4241359 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 86

Conread position: 546-680
Cow position: chr9:11098630-11098489 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 99

Conread position: 546-680
Cow position: chr9:12773516-12773653 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 14

Conread position: 547-680
Cow position: chr9:23956155-23956017 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 100

Conread position: 548-680
Cow position: chr9:39011643-39011506 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 48, 12

Conread position: 548-684
Cow position: chr9:34399493-34399638 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 549-678
Cow position: chr9:34286622-34286760 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 549-680
Cow position: chr9:28747694-28747557 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 97

Conread position: 550-680
Cow position: chr9:11380820-11380683 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 551-678
Cow position: chr9:22447468-22447333 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 551-679
Cow position: chr9:9596124-9595990 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 96

Conread position: 551-680
Cow position: chr9:12268861-12268993 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 92

Conread position: 551-680
Cow position: chr9:24887031-24887169 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 551-680
Cow position: chr9:34024525-34024662 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 551-682
Cow position: chr9:55577537-55577673 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 85

Conread position: 552-680
Cow position: chr9:6237663-6237530 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 86

Conread position: 552-680
Cow position: chr9:53323960-53323821 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 552-681
Cow position: chr9:5263331-5263464 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 91

Conread position: 553-680
Cow position: chr9:20579760-20579631 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 81

Conread position: 554-680
Cow position: chr9:28772970-28773102 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 554-680
Cow position: chr9:57131327-57131458 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 556-680
Cow position: chr9:34707479-34707348 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 558-679
Cow position: chr9:43159588-43159714 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 559-680
Cow position: chr9:11873461-11873341 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 76

Conread position: 561-680
Cow position: chr9:26394512-26394386 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 567-680
Cow position: chr9:52998536-52998416 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.