Cow genome map


           Conread name:
           Ss1.1-rret22_a12.5
        

               Conread position:
               480-680
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               520-680
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               525-680
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               534-680
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 103
               

               Conread position:
               536-680
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               539-680
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               540-680
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               540-681
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               543-680
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               543-680
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 99
               

               Conread position:
               544-680
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               546-680
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               547-676
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 35
               

               Conread position:
               547-680
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               547-680
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 35
               

               Conread position:
               548-680
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               549-678
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               550-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               550-704
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               551-678
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               551-678
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               551-679
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               551-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               551-681
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               551-713
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               552-680
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               553-680
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               554-680
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               555-680
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               558-680
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               559-681
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               
Show alignments to all cow chromosomes.