Cow genome map


           Conread name:
           Ss1.1-rret22_k12.5
        

               Conread position:
               95-476
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               114-470
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               98, 196
               

               Conread position:
               117-476
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               120-486
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               88, 63
               

               Conread position:
               127-457
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               128-469
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               129-406
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               83, 138
               

               Conread position:
               129-468
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               133-477
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               133-477
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               79, 108
               

               Conread position:
               134-476
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               84, 175
               

               Conread position:
               134-478
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               151, 120
               

               Conread position:
               135-477
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               78, 119
               

               Conread position:
               135-479
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               135-479
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               135-489
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               137-450
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               147-444
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               127, 48
               

               Conread position:
               147-473
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               147-477
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               9, 196
               

               Conread position:
               147-477
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               148-458
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               148-460
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 104
               

               Conread position:
               148-470
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               64, 324
               

               Conread position:
               148-471
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               128, 86
               

               Conread position:
               148-473
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               148-491
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 111
               

               Conread position:
               149-402
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               150-477
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               150-477
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               60, 206
               

               Conread position:
               150-495
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               151-477
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               154-471
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               154-477
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               154-479
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 193
               

               Conread position:
               165-391
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               165-477
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               165-479
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 98
               

               Conread position:
               166-477
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 116
               

               Conread position:
               167-435
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               177-469
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               35, 267
               

               Conread position:
               182-479
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               182-483
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 222
               

               Conread position:
               183-470
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 72
               

               Conread position:
               284-476
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               287-477
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               288-454
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               288-470
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 30
               

               Conread position:
               288-477
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               288-484
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               291-488
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               292-469
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               294-450
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               319-479
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               324-477
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               326-479
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               328-477
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               118, 0
               
Show alignments to all cow chromosomes.