Cow genome map
Conread name: | Ss1.1-rret22_k12.5 |
Conread position: | 1-261 |
Cow position: | chr11:20836847-20836582 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 56-412 |
Cow position: | chr11:75576598-75576233 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 239 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 35, 19 |
Conread position: | 101-476 |
Cow position: | chr11:16743297-16742900 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 277 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 107, 16 |
Conread position: | 116-460 |
Cow position: | chr11:56268835-56268496 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 233 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 8, 54 |
Conread position: | 120-473 |
Cow position: | chr11:48683028-48682682 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 248 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 92, 11 |
Conread position: | 121-456 |
Cow position: | chr11:26081212-26081560 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 231 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 83, 62 |
Conread position: | 121-476 |
Cow position: | chr11:20036266-20035902 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 246 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 44, 14 |
Conread position: | 125-458 |
Cow position: | chr11:35651046-35651388 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 237 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 83, 120 |
Conread position: | 125-477 |
Cow position: | chr11:39175989-39175633 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 236 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 83, 136 |
Conread position: | 128-479 |
Cow position: | chr11:28221103-28220736 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 249 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 80, 138 |
Conread position: | 129-487 |
Cow position: | chr11:65117213-65117580 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 247 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 82, 188 |
Conread position: | 133-479 |
Cow position: | chr11:61055388-61055738 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 230 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 81, 115 |
Conread position: | 135-358 |
Cow position: | chr11:65704134-65703906 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 150, 30 |
Conread position: | 135-460 |
Cow position: | chr11:76958785-76959097 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 214 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 73, 30 |
Conread position: | 137-475 |
Cow position: | chr11:41280408-41280058 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 137-477 |
Cow position: | chr11:55933421-55933783 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 140-477 |
Cow position: | chr11:77472054-77471720 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 233 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 82, 129 |
Conread position: | 147-296 |
Cow position: | chr11:14707678-14707827 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 53, 34 |
Conread position: | 147-475 |
Cow position: | chr11:42505772-42505434 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 233 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 65, 10 |
Conread position: | 147-479 |
Cow position: | chr11:79970664-79971014 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 238 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 78, 273 |
Conread position: | 148-326 |
Cow position: | chr11:7968394-7968578 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 133 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 129, 63 |
Conread position: | 148-468 |
Cow position: | chr11:53513633-53513947 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 211 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 14, 40 |
Conread position: | 148-472 |
Cow position: | chr11:25166847-25167174 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 217 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 60, 230 |
Conread position: | 148-476 |
Cow position: | chr11:54056068-54056397 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 227 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 77, 67 |
Conread position: | 148-476 |
Cow position: | chr11:66871754-66871408 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 233 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 64, 35 |
Conread position: | 148-477 |
Cow position: | chr11:24514685-24514350 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 232 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 64, 161 |
Conread position: | 148-477 |
Cow position: | chr11:65372863-65373203 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 227 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 62, 117 |
Conread position: | 148-482 |
Cow position: | chr11:42392950-42393288 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 234 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 14, 46 |
Conread position: | 153-477 |
Cow position: | chr11:84387017-84386702 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 230 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 59, 22 |
Conread position: | 156-484 |
Cow position: | chr11:48040634-48040973 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 232 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 47, 156 |
Conread position: | 165-493 |
Cow position: | chr11:2327886-2328225 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 228 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 38, 224 |
Conread position: | 170-466 |
Cow position: | chr11:14144394-14144093 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 200 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 42, 13 |
Conread position: | 175-452 |
Cow position: | chr11:71908403-71908131 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 194 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 175-479 |
Cow position: | chr11:45475749-45476044 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 217 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 37, 107 |
Conread position: | 175-485 |
Cow position: | chr11:39278366-39278690 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 215 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 37, 66 |
Conread position: | 231-429 |
Cow position: | chr11:83643902-83643710 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 139 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 99, 51 |
Conread position: | 280-477 |
Cow position: | chr11:73195013-73194820 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 30 |
Conread position: | 287-469 |
Cow position: | chr11:76697398-76697213 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 134 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 28, 109 |
Conread position: | 287-476 |
Cow position: | chr11:37968896-37969085 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 129 |
Conread position: | 289-507 |
Cow position: | chr11:42042339-42042120 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 150 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 197, 139 |
Conread position: | 294-479 |
Cow position: | chr11:77632119-77632300 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 158, 14 |
Conread position: | 317-477 |
Cow position: | chr11:41459510-41459667 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 17, 116 |
Conread position: | 331-479 |
Cow position: | chr11:7969175-7969324 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 62 |
Show alignments to all cow chromosomes.