Cow genome map

Conread name: Ss1.1-rret22_k12.5

Conread position: 109-473
Cow position: chr13:43153191-43153550 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 72

Conread position: 109-473
Cow position: chr13:43162130-43162487 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 72

Conread position: 119-454
Cow position: chr13:945405-945073 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 94, 24

Conread position: 135-463
Cow position: chr13:39614037-39613728 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 60

Conread position: 135-476
Cow position: chr13:14739539-14739189 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 186

Conread position: 135-493
Cow position: chr13:38640923-38640573 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 232
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 139, 48

Conread position: 137-477
Cow position: chr13:17791934-17791591 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 173

Conread position: 137-479
Cow position: chr13:15984212-15983863 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 24

Conread position: 148-350
Cow position: chr13:18519185-18519384 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 106

Conread position: 148-457
Cow position: chr13:20773239-20772942 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 105, 49

Conread position: 148-475
Cow position: chr13:15389391-15389710 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 65, 13

Conread position: 148-476
Cow position: chr13:5927703-5927380 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 30

Conread position: 148-476
Cow position: chr13:15811985-15812328 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 256

Conread position: 148-476
Cow position: chr13:26171808-26171484 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 140

Conread position: 148-477
Cow position: chr13:12532386-12532725 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 33

Conread position: 148-477
Cow position: chr13:29192422-29192085 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 70, 174

Conread position: 148-478
Cow position: chr13:33490536-33490856 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 133

Conread position: 148-480
Cow position: chr13:17535690-17535357 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 98

Conread position: 152-477
Cow position: chr13:11980351-11980004 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 31

Conread position: 165-471
Cow position: chr13:8958628-8958327 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 91

Conread position: 165-477
Cow position: chr13:17564495-17564825 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 47, 18

Conread position: 166-476
Cow position: chr13:6018617-6018934 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 24

Conread position: 178-479
Cow position: chr13:19852382-19852067 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 54

Conread position: 191-482
Cow position: chr13:15638238-15638539 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 57

Conread position: 288-475
Cow position: chr13:6753536-6753726 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 73

Conread position: 290-477
Cow position: chr13:29094178-29094362 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 290-479
Cow position: chr13:7732440-7732623 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 18

Conread position: 338-499
Cow position: chr13:17776199-17776039 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 146, 0

Show alignments to all cow chromosomes.