Cow genome map
| Conread name: | Ss1.1-rret22_k12.5 |
| Conread position: | 124-466 |
| Cow position: | chr14:45259794-45260154 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 39, 122 |
| Conread position: | 127-362 |
| Cow position: | chr14:41775235-41775000 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-473 |
| Cow position: | chr14:4779910-4780260 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 129-473 |
| Cow position: | chr14:21593661-21593309 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 84, 139 |
| Conread position: | 133-477 |
| Cow position: | chr14:1672060-1672402 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 92, 74 |
| Conread position: | 135-453 |
| Cow position: | chr14:21185106-21185414 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 136-361 |
| Cow position: | chr14:22594157-22593922 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 140-507 |
| Cow position: | chr14:25124448-25124067 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 310 |
| Conread position: | 148-283 |
| Cow position: | chr14:43264983-43265119 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 148-435 |
| Cow position: | chr14:46298540-46298250 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 148-446 |
| Cow position: | chr14:1600027-1600323 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 148-479 |
| Cow position: | chr14:6765796-6765461 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 151-442 |
| Cow position: | chr14:13443289-13443012 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 81 |
| Conread position: | 151-477 |
| Cow position: | chr14:41469791-41469457 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 11, 212 |
| Conread position: | 165-479 |
| Cow position: | chr14:48821923-48822236 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 166-471 |
| Cow position: | chr14:7394976-7394676 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 174-477 |
| Cow position: | chr14:25414877-25415186 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 175-483 |
| Cow position: | chr14:19589394-19589073 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 146 |
| Conread position: | 189-477 |
| Cow position: | chr14:22982821-22983114 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 303-475 |
| Cow position: | chr14:27226225-27226397 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 316-479 |
| Cow position: | chr14:37708038-37708204 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.