Cow genome map


           Conread name:
           Ss1.1-rret22_k12.5
        

               Conread position:
               111-479
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               107, 72
               

               Conread position:
               125-497
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 89
               

               Conread position:
               126-478
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               130-478
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               134-478
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               135-427
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               131, 262
               

               Conread position:
               135-472
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               135-479
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 136
               

               Conread position:
               148-284
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 35
               

               Conread position:
               148-445
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               148-471
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               54, 166
               

               Conread position:
               148-474
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               70, 37
               

               Conread position:
               148-474
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 134
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               148-479
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               148-490
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 35
               

               Conread position:
               150-468
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               150-477
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               155-453
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               156-473
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               170-471
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               183-477
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               288-472
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               290-473
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 18
               
Show alignments to all cow chromosomes.