Cow genome map


           Conread name:
           Ss1.1-rret22_k12.5
        

               Conread position:
               128-471
               

               Cow position:
               chr17:13411960-13411618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               84, 154
               

               Conread position:
               147-479
               

               Cow position:
               chr17:44825316-44825661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               148-390
               

               Cow position:
               chr17:15738715-15738469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               148-425
               

               Cow position:
               chr17:17256594-17256317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               150-473
               

               Cow position:
               chr17:28115918-28116252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               158-465
               

               Cow position:
               chr17:39612249-39612561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               50, 167
               

               Conread position:
               165-483
               

               Cow position:
               chr17:13075395-13075724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 83
               

               Conread position:
               290-471
               

               Cow position:
               chr17:26943322-26943498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               290-491
               

               Cow position:
               chr17:36000894-36001097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               307-477
               

               Cow position:
               chr17:1019256-1019425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 84
               
Show alignments to all cow chromosomes.