Cow genome map
| Conread name: | Ss1.1-rret22_k12.5 |
| Conread position: | 126-478 |
| Cow position: | chr19:20040504-20040854 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 148 |
| Conread position: | 128-471 |
| Cow position: | chr19:25666900-25666557 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 83, 154 |
| Conread position: | 129-450 |
| Cow position: | chr19:33716137-33716464 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 58, 155 |
| Conread position: | 136-461 |
| Cow position: | chr19:25836314-25836654 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 191 |
| Conread position: | 137-477 |
| Cow position: | chr19:9113143-9112769 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 213 |
| Conread position: | 148-394 |
| Cow position: | chr19:47199723-47199968 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 148-478 |
| Cow position: | chr19:28621899-28621563 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 148-479 |
| Cow position: | chr19:55258994-55259316 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 17 |
| Conread position: | 151-512 |
| Cow position: | chr19:4265710-4266072 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 154-395 |
| Cow position: | chr19:8530865-8530618 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 167-471 |
| Cow position: | chr19:976498-976816 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 45, 144 |
| Conread position: | 175-473 |
| Cow position: | chr19:25841266-25840961 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 175-476 |
| Cow position: | chr19:21859500-21859826 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 178-477 |
| Cow position: | chr19:15504759-15505060 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 187-473 |
| Cow position: | chr19:2954875-2954588 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 290-495 |
| Cow position: | chr19:23823361-23823155 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 316-468 |
| Cow position: | chr19:33180272-33180423 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 324-479 |
| Cow position: | chr19:15875993-15875836 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 326-479 |
| Cow position: | chr19:43505785-43505939 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 80 |
Show alignments to all cow chromosomes.