Cow genome map
| Conread name: | Ss1.1-rret22_k12.5 |
| Conread position: | 127-438 |
| Cow position: | chr21:40886686-40886993 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 128-479 |
| Cow position: | chr21:24161980-24161622 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 133-367 |
| Cow position: | chr21:2727995-2728220 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 135-475 |
| Cow position: | chr21:41811280-41811615 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 90 |
| Conread position: | 148-410 |
| Cow position: | chr21:47198327-47198593 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 210 |
| Conread position: | 148-463 |
| Cow position: | chr21:4510803-4511122 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 148-477 |
| Cow position: | chr21:33717767-33718090 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 148-489 |
| Cow position: | chr21:30880153-30880511 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 288 |
| Conread position: | 149-460 |
| Cow position: | chr21:37559321-37559638 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 149-479 |
| Cow position: | chr21:5060842-5061173 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 86 |
| Conread position: | 150-475 |
| Cow position: | chr21:24566993-24567310 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 151-457 |
| Cow position: | chr21:34859552-34859240 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 142, 188 |
| Conread position: | 154-476 |
| Cow position: | chr21:14507147-14506813 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 167-478 |
| Cow position: | chr21:12976834-12977152 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 186-493 |
| Cow position: | chr21:30683309-30683611 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 228-476 |
| Cow position: | chr21:13508134-13507889 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 72 |
Show alignments to all cow chromosomes.