Cow genome map
| Conread name: | Ss1.1-rret22_k12.5 |
| Conread position: | 114-495 |
| Cow position: | chr22:24473788-24473405 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 106, 7 |
| Conread position: | 121-477 |
| Cow position: | chr22:7307316-7307678 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 124-477 |
| Cow position: | chr22:32004293-32004656 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 126-353 |
| Cow position: | chr22:4254184-4254418 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 126-436 |
| Cow position: | chr22:29833320-29833636 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 114 |
| Conread position: | 133-253 |
| Cow position: | chr22:7299567-7299446 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 135-471 |
| Cow position: | chr22:44634258-44633926 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 75, 121 |
| Conread position: | 135-473 |
| Cow position: | chr22:5700818-5701149 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 85, 113 |
| Conread position: | 137-484 |
| Cow position: | chr22:35711355-35711706 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 181 |
| Conread position: | 137-501 |
| Cow position: | chr22:42940551-42940918 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 148, 70 |
| Conread position: | 139-389 |
| Cow position: | chr22:33639050-33639309 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 148-451 |
| Cow position: | chr22:28573626-28573308 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 148-456 |
| Cow position: | chr22:18261885-18261590 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 148-473 |
| Cow position: | chr22:35778515-35778841 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 148-477 |
| Cow position: | chr22:29609709-29610048 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 60, 239 |
| Conread position: | 149-473 |
| Cow position: | chr22:38741332-38741004 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 62 |
| Conread position: | 150-477 |
| Cow position: | chr22:19285111-19284777 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 151-472 |
| Cow position: | chr22:22615422-22615109 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 151-475 |
| Cow position: | chr22:3766807-3766483 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 176-486 |
| Cow position: | chr22:6616296-6616622 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 192-484 |
| Cow position: | chr22:8704264-8704564 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 212-479 |
| Cow position: | chr22:43267282-43267006 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 221-478 |
| Cow position: | chr22:26249344-26249082 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 57, 195 |
| Conread position: | 290-472 |
| Cow position: | chr22:29570257-29570072 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 293-488 |
| Cow position: | chr22:28399066-28399261 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 328-479 |
| Cow position: | chr22:32849387-32849237 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 125 |
Show alignments to all cow chromosomes.