Cow genome map
| Conread name: | Ss1.1-rret22_k12.5 |
| Conread position: | 120-444 |
| Cow position: | chr23:29313112-29312788 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 187 |
| Conread position: | 133-282 |
| Cow position: | chr23:16030580-16030429 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 139-479 |
| Cow position: | chr23:36364522-36364875 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 143-523 |
| Cow position: | chr23:37321191-37320808 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 107 |
| Conread position: | 147-458 |
| Cow position: | chr23:7585796-7586102 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 67, 161 |
| Conread position: | 147-470 |
| Cow position: | chr23:37180138-37179808 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 148-477 |
| Cow position: | chr23:37627797-37627455 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 12, 180 |
| Conread position: | 148-486 |
| Cow position: | chr23:8242659-8242998 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 100 |
| Conread position: | 150-477 |
| Cow position: | chr23:1982003-1982338 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 151-283 |
| Cow position: | chr23:14167943-14168076 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 152-477 |
| Cow position: | chr23:12005280-12004951 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 175-471 |
| Cow position: | chr23:27671116-27671414 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 177-479 |
| Cow position: | chr23:33417247-33416929 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 182-475 |
| Cow position: | chr23:14128989-14129292 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 137 |
| Conread position: | 290-477 |
| Cow position: | chr23:16488000-16487815 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 175, 19 |
| Conread position: | 290-479 |
| Cow position: | chr23:7005615-7005428 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 309-508 |
| Cow position: | chr23:31088875-31089075 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 316-488 |
| Cow position: | chr23:25857394-25857219 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.