Cow genome map
| Conread name: | Ss1.1-rret22_k12.5 |
| Conread position: | 127-456 |
| Cow position: | chr29:19376094-19376419 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 67 |
| Conread position: | 133-465 |
| Cow position: | chr29:18590510-18590853 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 81, 130 |
| Conread position: | 133-477 |
| Cow position: | chr29:27614591-27614923 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 137 |
| Conread position: | 135-373 |
| Cow position: | chr29:5607915-5607671 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 117, 179 |
| Conread position: | 135-473 |
| Cow position: | chr29:1767229-1766888 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 148-281 |
| Cow position: | chr29:25407332-25407465 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 148-470 |
| Cow position: | chr29:3776569-3776880 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 148-473 |
| Cow position: | chr29:6173200-6172861 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 148-477 |
| Cow position: | chr29:36739779-36740110 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 112 |
| Conread position: | 148-490 |
| Cow position: | chr29:11479999-11479653 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 158 |
| Conread position: | 151-460 |
| Cow position: | chr29:38416957-38416640 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 159-405 |
| Cow position: | chr29:30115207-30115454 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 151 |
| Conread position: | 182-475 |
| Cow position: | chr29:2486165-2486455 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 185-477 |
| Cow position: | chr29:5096693-5096400 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 353-483 |
| Cow position: | chr29:9148308-9148178 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 49 |
Show alignments to all cow chromosomes.