Cow genome map


           Conread name:
           Ss1.1-rret22_k12.5
        

               Conread position:
               98-451
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               115, 49
               

               Conread position:
               122-458
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 100
               

               Conread position:
               126-460
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 272
               

               Conread position:
               128-450
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               27, 72
               

               Conread position:
               128-477
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               80, 122
               

               Conread position:
               129-479
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 126
               

               Conread position:
               133-455
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 223
               

               Conread position:
               133-470
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               29, 184
               

               Conread position:
               133-472
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               135-477
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               135-477
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               84, 181
               

               Conread position:
               135-477
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               73, 261
               

               Conread position:
               135-482
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               139-485
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               142-477
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               148-392
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               148-454
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               148-475
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               64, 88
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               150-467
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               59, 283
               

               Conread position:
               150-471
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               62, 175
               

               Conread position:
               152-479
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               153-488
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               167-473
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               170-452
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 127
               

               Conread position:
               170-477
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               173-476
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               182-475
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               182-479
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               188-487
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               198-479
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               227-477
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 90
               

               Conread position:
               286-477
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               287-483
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               288-466
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               324-479
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               12, 138
               
Show alignments to all cow chromosomes.