Cow genome map


           Conread name:
           Ss1.1-rsag020_e16.5
        

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               5-251
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               167, 9
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               8-306
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               150, 6
               

               Conread position:
               8-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               10-313
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               11-492
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 21
               

               Conread position:
               13-323
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               13-343
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               14-179
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               14-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               16-200
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               143, 135
               

               Conread position:
               29-323
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               29-419
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 29
               

               Conread position:
               39-290
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               139, 112
               

               Conread position:
               39-290
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               39-321
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               39-323
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               41-257
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               44-243
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               52-332
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               59-332
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               60-332
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 93
               

               Conread position:
               61-332
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               62-328
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               75-323
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               
Show alignments to all cow chromosomes.