Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-326 |
| Cow position: | chr13:41361104-41361445 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 2-332 |
| Cow position: | chr13:3015856-3015517 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 5-179 |
| Cow position: | chr13:47850617-47850788 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 5-263 |
| Cow position: | chr13:44991689-44991948 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 8-309 |
| Cow position: | chr13:42717654-42717354 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 173, 7 |
| Conread position: | 13-273 |
| Cow position: | chr13:23266162-23266429 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 29-268 |
| Cow position: | chr13:5925502-5925261 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 130, 54 |
| Conread position: | 29-269 |
| Cow position: | chr13:44634803-44635050 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 29-306 |
| Cow position: | chr13:17378319-17378035 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 31 |
| Conread position: | 29-323 |
| Cow position: | chr13:32183155-32182861 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 30-215 |
| Cow position: | chr13:20511890-20511706 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 55 |
| Conread position: | 43-232 |
| Cow position: | chr13:53856899-53857090 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 43-306 |
| Cow position: | chr13:17048615-17048883 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 53-254 |
| Cow position: | chr13:4519403-4519608 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 60-323 |
| Cow position: | chr13:46465589-46465872 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 61-330 |
| Cow position: | chr13:43974331-43974620 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 61-332 |
| Cow position: | chr13:15280915-15280624 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 62-302 |
| Cow position: | chr13:3800023-3799768 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 161 |
| Conread position: | 63-299 |
| Cow position: | chr13:41398406-41398162 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 32 |
Show alignments to all cow chromosomes.