Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-323 |
| Cow position: | chr14:3437641-3437971 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 5-158 |
| Cow position: | chr14:18531605-18531456 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 5-269 |
| Cow position: | chr14:10485369-10485103 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 5-332 |
| Cow position: | chr14:37179820-37180167 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 154, 29 |
| Conread position: | 8-254 |
| Cow position: | chr14:24837353-24837101 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 151, 6 |
| Conread position: | 8-290 |
| Cow position: | chr14:37353089-37353375 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 6 |
| Conread position: | 8-323 |
| Cow position: | chr14:20468846-20468538 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 6 |
| Conread position: | 14-254 |
| Cow position: | chr14:34355105-34354860 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 145, 40 |
| Conread position: | 15-225 |
| Cow position: | chr14:26287479-26287268 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 143, 22 |
| Conread position: | 16-275 |
| Cow position: | chr14:27208233-27208497 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 143, 15 |
| Conread position: | 29-273 |
| Cow position: | chr14:40880257-40880002 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 29-350 |
| Cow position: | chr14:27822536-27822870 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 131, 170 |
| Conread position: | 39-273 |
| Cow position: | chr14:49480168-49479929 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 39-322 |
| Cow position: | chr14:39505202-39505501 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 60-323 |
| Cow position: | chr14:36109342-36109622 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 60-332 |
| Cow position: | chr14:5491802-5492094 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 60-332 |
| Cow position: | chr14:8884396-8884680 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 78 |
Show alignments to all cow chromosomes.