Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-272 |
| Cow position: | chr15:22564760-22565034 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 1-290 |
| Cow position: | chr15:10839513-10839219 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 159, 13 |
| Conread position: | 1-323 |
| Cow position: | chr15:42102411-42102065 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 5-261 |
| Cow position: | chr15:38906060-38905803 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 5-320 |
| Cow position: | chr15:19655561-19655240 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 5-323 |
| Cow position: | chr15:24639571-24639247 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 147, 11 |
| Conread position: | 5-355 |
| Cow position: | chr15:9369162-9368799 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 12-257 |
| Cow position: | chr15:34056988-34057242 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 13-173 |
| Cow position: | chr15:9038369-9038525 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 13-234 |
| Cow position: | chr15:22619836-22619616 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 147, 19 |
| Conread position: | 13-269 |
| Cow position: | chr15:48026537-48026284 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 13-323 |
| Cow position: | chr15:34102323-34102642 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 14-254 |
| Cow position: | chr15:16583281-16583037 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 16-261 |
| Cow position: | chr15:24874838-24875087 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 29-276 |
| Cow position: | chr15:15173106-15172847 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 39-273 |
| Cow position: | chr15:47342460-47342705 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 103 |
| Conread position: | 60-229 |
| Cow position: | chr15:22561464-22561291 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 60-321 |
| Cow position: | chr15:5913092-5913373 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 61-307 |
| Cow position: | chr15:27711614-27711879 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.