Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-176 |
| Cow position: | chr16:21318752-21318581 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 156, 13 |
| Conread position: | 5-320 |
| Cow position: | chr16:16286212-16285886 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 5-322 |
| Cow position: | chr16:20722341-20722026 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 5-355 |
| Cow position: | chr16:34209553-34209192 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 8-225 |
| Cow position: | chr16:13601419-13601638 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 150, 6 |
| Conread position: | 8-290 |
| Cow position: | chr16:39760709-39760425 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 6 |
| Conread position: | 8-322 |
| Cow position: | chr16:31827174-31826866 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 266, 7 |
| Conread position: | 11-229 |
| Cow position: | chr16:24390551-24390330 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 148, 21 |
| Conread position: | 13-179 |
| Cow position: | chr16:27589316-27589478 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 13-243 |
| Cow position: | chr16:55748125-55748357 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 144, 17 |
| Conread position: | 13-253 |
| Cow position: | chr16:47918886-47918648 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 145, 25 |
| Conread position: | 15-328 |
| Cow position: | chr16:53214740-53214404 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 16-309 |
| Cow position: | chr16:38290439-38290747 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 17 |
| Conread position: | 29-245 |
| Cow position: | chr16:31389192-31389410 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 30-323 |
| Cow position: | chr16:40284581-40284267 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 100 |
| Conread position: | 39-355 |
| Cow position: | chr16:4018483-4018812 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 136, 159 |
| Conread position: | 43-309 |
| Cow position: | chr16:44436046-44435770 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 61-332 |
| Cow position: | chr16:23532848-23533138 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 74-328 |
| Cow position: | chr16:1652461-1652197 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 21 |
Show alignments to all cow chromosomes.