Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-229 |
| Cow position: | chr21:47823533-47823762 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 5-247 |
| Cow position: | chr21:9968113-9968355 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 151, 9 |
| Conread position: | 5-323 |
| Cow position: | chr21:4940226-4939899 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 5-323 |
| Cow position: | chr21:39385458-39385786 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 8-158 |
| Cow position: | chr21:1177709-1177848 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 12-237 |
| Cow position: | chr21:19623133-19622901 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 194 |
| Conread position: | 13-266 |
| Cow position: | chr21:15933407-15933149 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 144, 29 |
| Conread position: | 29-273 |
| Cow position: | chr21:28500675-28500420 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 29-306 |
| Cow position: | chr21:40617905-40618203 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 40-280 |
| Cow position: | chr21:28173552-28173801 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 118, 109 |
| Conread position: | 42-323 |
| Cow position: | chr21:446761-446465 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 44-232 |
| Cow position: | chr21:29975896-29976092 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 60-328 |
| Cow position: | chr21:4732531-4732816 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 60-332 |
| Cow position: | chr21:24698163-24697881 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 246 |
| Conread position: | 62-323 |
| Cow position: | chr21:5593314-5593589 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 95, 171 |
Show alignments to all cow chromosomes.