Cow genome map


           Conread name:
           Ss1.1-rsag020_e16.5
        

               Conread position:
               1-294
               

               Cow position:
               chr22:12691061-12691356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               5-304
               

               Cow position:
               chr22:32223595-32223302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               170, 9
               

               Conread position:
               8-273
               

               Cow position:
               chr22:25796604-25796880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 6
               

               Conread position:
               8-278
               

               Cow position:
               chr22:7288131-7287862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               150, 7
               

               Conread position:
               13-311
               

               Cow position:
               chr22:23618630-23618935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               13-323
               

               Cow position:
               chr22:34016816-34017142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               146, 21
               

               Conread position:
               15-323
               

               Cow position:
               chr22:18218342-18218655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               21-273
               

               Cow position:
               chr22:23206766-23207020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               39-323
               

               Cow position:
               chr22:42722701-42722993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 192
               

               Conread position:
               39-352
               

               Cow position:
               chr22:37996457-37996775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               60-324
               

               Cow position:
               chr22:23581970-23582236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               99, 189
               

               Conread position:
               61-332
               

               Cow position:
               chr22:19139866-19140155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 0
               
Show alignments to all cow chromosomes.