Cow genome map


           Conread name:
           Ss1.1-rsag020_e16.5
        

               Conread position:
               1-304
               

               Cow position:
               chr23:6698727-6698412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               5-243
               

               Cow position:
               chr23:6688174-6688399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               14-245
               

               Cow position:
               chr23:28743578-28743345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               14-333
               

               Cow position:
               chr23:30837712-30838029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               29-184
               

               Cow position:
               chr23:14943300-14943143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               131, 32
               

               Conread position:
               30-273
               

               Cow position:
               chr23:16654783-16654529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               30-337
               

               Cow position:
               chr23:11399753-11399426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               31-254
               

               Cow position:
               chr23:15866048-15866275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               127, 86
               

               Conread position:
               39-309
               

               Cow position:
               chr23:14268143-14267859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               40-273
               

               Cow position:
               chr23:11023134-11023371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               63-229
               

               Cow position:
               chr23:17248118-17247951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               81-332
               

               Cow position:
               chr23:20152405-20152676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 0
               
Show alignments to all cow chromosomes.