Cow genome map


           Conread name:
           Ss1.1-rsag020_e16.5
        

               Conread position:
               1-323
               

               Cow position:
               chr24:19782763-19782432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               5-297
               

               Cow position:
               chr24:16564277-16563974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               147, 9
               

               Conread position:
               8-215
               

               Cow position:
               chr24:34197461-34197252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               143, 6
               

               Conread position:
               8-351
               

               Cow position:
               chr24:15344748-15344415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 6
               

               Conread position:
               13-218
               

               Cow position:
               chr24:37434257-37434465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 23
               

               Conread position:
               13-325
               

               Cow position:
               chr24:29071446-29071775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               29-238
               

               Cow position:
               chr24:6237168-6236960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               129, 49
               

               Conread position:
               30-335
               

               Cow position:
               chr24:6501698-6502017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               39-245
               

               Cow position:
               chr24:5885125-5885339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               43-172
               

               Cow position:
               chr24:43658980-43658851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               61-254
               

               Cow position:
               chr24:41333293-41333496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               61-276
               

               Cow position:
               chr24:6416089-6415864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 75
               
Show alignments to all cow chromosomes.