Cow genome map


           Conread name:
           Ss1.1-rsag020_e16.5
        

               Conread position:
               1-173
               

               Cow position:
               chr26:9494068-9494236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               157, 14
               

               Conread position:
               1-254
               

               Cow position:
               chr26:31794466-31794213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               13-344
               

               Cow position:
               chr26:21691454-21691794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               14-176
               

               Cow position:
               chr26:15624392-15624552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               14-254
               

               Cow position:
               chr26:21659056-21658811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               15-176
               

               Cow position:
               chr26:17688421-17688579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               144, 18
               

               Conread position:
               29-232
               

               Cow position:
               chr26:21638909-21639117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               128, 11
               

               Conread position:
               40-284
               

               Cow position:
               chr26:20248278-20248032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 187
               

               Conread position:
               61-328
               

               Cow position:
               chr26:23520344-23520061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 6
               

               Conread position:
               65-320
               

               Cow position:
               chr26:7603373-7603648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 0
               
Show alignments to all cow chromosomes.