Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 5-333 |
| Cow position: | chr4:61128602-61128940 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 10-251 |
| Cow position: | chr4:5134432-5134199 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 148, 20 |
| Conread position: | 13-294 |
| Cow position: | chr4:40576254-40576542 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 13-346 |
| Cow position: | chr4:57206219-57205875 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 168, 21 |
| Conread position: | 15-257 |
| Cow position: | chr4:52253113-52252867 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 143, 21 |
| Conread position: | 15-309 |
| Cow position: | chr4:44577037-44577345 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 28-229 |
| Cow position: | chr4:33442948-33443154 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 130, 89 |
| Conread position: | 30-272 |
| Cow position: | chr4:33196546-33196797 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 39-323 |
| Cow position: | chr4:23888608-23888912 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 41-221 |
| Cow position: | chr4:36818267-36818453 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 112 |
| Conread position: | 41-273 |
| Cow position: | chr4:46031974-46031734 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 53-226 |
| Cow position: | chr4:16246397-16246573 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 55-332 |
| Cow position: | chr4:31174876-31174581 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 60-309 |
| Cow position: | chr4:27185963-27186225 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 99, 150 |
| Conread position: | 61-332 |
| Cow position: | chr4:43895928-43896216 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 62-332 |
| Cow position: | chr4:43884656-43884374 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.