Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-332 |
| Cow position: | chr5:35262171-35261827 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 4-155 |
| Cow position: | chr5:18479122-18478977 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 5-325 |
| Cow position: | chr5:32260768-32261100 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 13-247 |
| Cow position: | chr5:51877027-51876788 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 13-251 |
| Cow position: | chr5:33175749-33175514 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 146, 13 |
| Conread position: | 15-323 |
| Cow position: | chr5:16959769-16960060 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 115, 23 |
| Conread position: | 29-332 |
| Cow position: | chr5:23351759-23351447 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 29-345 |
| Cow position: | chr5:37714916-37715253 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 30-357 |
| Cow position: | chr5:43031871-43031546 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 32-328 |
| Cow position: | chr5:53405887-53406202 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 39-254 |
| Cow position: | chr5:35967870-35967648 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 61-330 |
| Cow position: | chr5:62427912-62427621 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 61-333 |
| Cow position: | chr5:2918127-2917838 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 266 |
| Conread position: | 61-421 |
| Cow position: | chr5:27201191-27201570 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 40, 303 |
Show alignments to all cow chromosomes.