Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-181 |
| Cow position: | chr8:10790915-10791095 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 2-231 |
| Cow position: | chr8:20006160-20006380 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 156, 13 |
| Conread position: | 5-226 |
| Cow position: | chr8:29301942-29302161 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 145, 9 |
| Conread position: | 5-228 |
| Cow position: | chr8:25496014-25496233 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 170, 9 |
| Conread position: | 5-299 |
| Cow position: | chr8:43016816-43017102 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 9 |
| Conread position: | 8-323 |
| Cow position: | chr8:28335895-28336204 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 10-176 |
| Cow position: | chr8:39577025-39576862 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 13-176 |
| Cow position: | chr8:13214402-13214560 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 13-179 |
| Cow position: | chr8:8638138-8638299 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 13-229 |
| Cow position: | chr8:52619637-52619857 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 13-255 |
| Cow position: | chr8:5235501-5235746 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 146, 19 |
| Conread position: | 13-273 |
| Cow position: | chr8:21121402-21121658 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 162, 24 |
| Conread position: | 16-348 |
| Cow position: | chr8:6468155-6468504 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 29-260 |
| Cow position: | chr8:37240662-37240419 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 65 |
| Conread position: | 30-229 |
| Cow position: | chr8:36855983-36856185 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 39-241 |
| Cow position: | chr8:61613599-61613806 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 39-332 |
| Cow position: | chr8:31262333-31262033 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 39-355 |
| Cow position: | chr8:5389948-5390270 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 279 |
| Conread position: | 54-309 |
| Cow position: | chr8:29038967-29038697 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 60-323 |
| Cow position: | chr8:26039695-26039418 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 61-240 |
| Cow position: | chr8:53989530-53989717 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 61-332 |
| Cow position: | chr8:25672375-25672086 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 63-329 |
| Cow position: | chr8:28982418-28982689 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 109-339 |
| Cow position: | chr8:34483256-34483501 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 230 |
Show alignments to all cow chromosomes.