Cow genome map
| Conread name: | Ss1.1-rsag020_e16.5 |
| Conread position: | 1-323 |
| Cow position: | chr9:32293972-32293653 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 2-229 |
| Cow position: | chr9:23852011-23851779 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 4-218 |
| Cow position: | chr9:5880322-5880103 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 154, 10 |
| Conread position: | 5-346 |
| Cow position: | chr9:42930792-42931136 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 8-262 |
| Cow position: | chr9:13115701-13115961 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 8-329 |
| Cow position: | chr9:56562532-56562207 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 8 |
| Conread position: | 13-323 |
| Cow position: | chr9:58251916-58252249 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 15-254 |
| Cow position: | chr9:32582533-32582292 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 162, 22 |
| Conread position: | 15-323 |
| Cow position: | chr9:46237474-46237796 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 17 |
| Conread position: | 28-353 |
| Cow position: | chr9:29008556-29008903 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 291 |
| Conread position: | 31-345 |
| Cow position: | chr9:39430865-39430543 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 208 |
| Conread position: | 39-283 |
| Cow position: | chr9:34956100-34956352 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 45-305 |
| Cow position: | chr9:29237230-29237505 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 175 |
| Conread position: | 53-306 |
| Cow position: | chr9:55264434-55264162 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 60-332 |
| Cow position: | chr9:12259515-12259801 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 174 |
| Conread position: | 60-332 |
| Cow position: | chr9:47882545-47882837 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 67-254 |
| Cow position: | chr9:59507487-59507681 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 92, 8 |
Show alignments to all cow chromosomes.