Cow genome map
| Conread name: | Ss1.1-rspc005_m16.5 |
| Conread position: | 1654-1818 |
| Cow position: | chr11:66129981-66129815 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 1656-1840 |
| Cow position: | chr11:53746039-53745849 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 1658-1812 |
| Cow position: | chr11:20516335-20516179 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 1658-1893 |
| Cow position: | chr11:56555692-56555932 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 1658-1981 |
| Cow position: | chr11:21577269-21577606 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 1658-1983 |
| Cow position: | chr11:81327079-81327395 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 1664-1847 |
| Cow position: | chr11:65405014-65404832 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 1664-1973 |
| Cow position: | chr11:2799442-2799108 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 1664-1975 |
| Cow position: | chr11:55796798-55796475 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 154, 17 |
| Conread position: | 1664-1983 |
| Cow position: | chr11:52268096-52267759 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 155 |
| Conread position: | 1667-1982 |
| Cow position: | chr11:58047335-58047659 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 1675-1983 |
| Cow position: | chr11:21835399-21835079 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 124 |
| Conread position: | 1677-1974 |
| Cow position: | chr11:56004070-56003782 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 1686-1984 |
| Cow position: | chr11:28639060-28639371 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 1714-1965 |
| Cow position: | chr11:71003363-71003627 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 1714-1983 |
| Cow position: | chr11:11487215-11487482 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1714-1983 |
| Cow position: | chr11:44024028-44024306 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 1714-1983 |
| Cow position: | chr11:51479754-51480031 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 1714-1983 |
| Cow position: | chr11:75457950-75457671 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 1716-1983 |
| Cow position: | chr11:16999768-17000044 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 1737-1983 |
| Cow position: | chr11:10170687-10170944 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 1738-1983 |
| Cow position: | chr11:15098502-15098748 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 1740-1983 |
| Cow position: | chr11:5335897-5336143 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 115 |
| Conread position: | 1744-1983 |
| Cow position: | chr11:80411622-80411379 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 1746-1983 |
| Cow position: | chr11:59956106-59956349 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 1752-1983 |
| Cow position: | chr11:46034601-46034371 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 84, 27 |
Show alignments to all cow chromosomes.