Cow genome map


           Conread name:
           Ss1.1-rspc005_m16.5
        

               Conread position:
               1657-1981
               

               Cow position:
               chr22:6361806-6361495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               79, 27
               

               Conread position:
               1686-1890
               

               Cow position:
               chr22:7238367-7238578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               54, 166
               

               Conread position:
               1689-1983
               

               Cow position:
               chr22:27505603-27505904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               1691-1983
               

               Cow position:
               chr22:38252503-38252204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 147
               

               Conread position:
               1697-1983
               

               Cow position:
               chr22:35610596-35610887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               1706-1980
               

               Cow position:
               chr22:15331447-15331722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               1714-1983
               

               Cow position:
               chr22:41962299-41962027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               1737-1983
               

               Cow position:
               chr22:17355513-17355754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 109
               

               Conread position:
               1751-1981
               

               Cow position:
               chr22:32475804-32476038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 89
               
Show alignments to all cow chromosomes.