Cow genome map

Conread name: Ss1.1-rspc005_m16.5

Conread position: 4-250
Cow position: chr9:48190379-48190638 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 247-436
Cow position: chr9:48197295-48197484 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 434-775
Cow position: chr9:48202260-48202601 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 774-986
Cow position: chr9:48204182-48204394 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 984-1180
Cow position: chr9:48204596-48204792 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1177-1288
Cow position: chr9:48207361-48207472 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 99
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1285-1722
Cow position: chr9:48209603-48210032 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 164

Conread position: 1648-1983
Cow position: chr9:35207466-35207821 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 182

Conread position: 1652-1983
Cow position: chr9:64107292-64107642 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 27

Conread position: 1653-1987
Cow position: chr9:23126517-23126840 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 30

Conread position: 1658-1812
Cow position: chr9:11219695-11219536 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1658-1982
Cow position: chr9:40406004-40405668 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 21

Conread position: 1658-1983
Cow position: chr9:55254084-55254417 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 130

Conread position: 1661-1973
Cow position: chr9:33805608-33805929 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 189

Conread position: 1661-1983
Cow position: chr9:18640345-18640680 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 23

Conread position: 1661-1983
Cow position: chr9:33090798-33090469 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 23

Conread position: 1661-1983
Cow position: chr9:50724709-50725043 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 18

Conread position: 1661-1983
Cow position: chr9:60075180-60074851 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 23

Conread position: 1669-1983
Cow position: chr9:38030669-38031001 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 12

Conread position: 1686-1979
Cow position: chr9:44825753-44825443 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 105

Conread position: 1686-1983
Cow position: chr9:11044907-11045214 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 132

Conread position: 1686-1983
Cow position: chr9:39135112-39135418 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 132

Conread position: 1686-1983
Cow position: chr9:47714550-47714235 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 91

Conread position: 1714-1981
Cow position: chr9:28118863-28119134 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 52

Conread position: 1715-1994
Cow position: chr9:44356793-44357076 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 64

Conread position: 1725-1981
Cow position: chr9:48210125-48210374 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 1741-1983
Cow position: chr9:50193116-50193364 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 44

Conread position: 1787-1981
Cow position: chr9:34077717-34077922 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.