Cow genome map

Conread name: Ss1.1-rspc033_l13.5

Conread position: 2-588
Cow position: chr1:81841325-81840740 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 394
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 8, 72

Conread position: 4-564
Cow position: chr1:38399172-38399698 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 380
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 21

Conread position: 5-419
Cow position: chr1:82912009-82911571 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 300
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 61, 92

Conread position: 5-601
Cow position: chr1:56164688-56165299 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 96

Conread position: 7-632
Cow position: chr1:80358028-80357353 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 7-638
Cow position: chr1:31364956-31364280 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 359

Conread position: 8-383
Cow position: chr1:23052904-23053283 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 134, 62

Conread position: 12-455
Cow position: chr1:89481982-89482438 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 12-643
Cow position: chr1:42737593-42738254 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 12-643
Cow position: chr1:72984630-72985277 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 135

Conread position: 15-588
Cow position: chr1:102781149-102780580 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 9

Conread position: 15-603
Cow position: chr1:57658038-57658671 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 362

Conread position: 16-371
Cow position: chr1:41519600-41519241 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 32

Conread position: 16-418
Cow position: chr1:72038414-72037986 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 305

Conread position: 16-514
Cow position: chr1:29039192-29039711 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 304

Conread position: 16-564
Cow position: chr1:63502965-63503519 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 114

Conread position: 16-575
Cow position: chr1:73197873-73197290 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 336

Conread position: 16-580
Cow position: chr1:31417347-31416762 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 41

Conread position: 16-598
Cow position: chr1:13581829-13581225 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 56

Conread position: 16-601
Cow position: chr1:47162479-47161855 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 414
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 116

Conread position: 16-601
Cow position: chr1:56193015-56192389 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 355

Conread position: 16-601
Cow position: chr1:68606391-68605767 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 16-638
Cow position: chr1:79635825-79635176 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 16-642
Cow position: chr1:56724307-56724972 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 16-642
Cow position: chr1:82653815-82654480 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 303

Conread position: 17-292
Cow position: chr1:58338113-58338421 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 17-336
Cow position: chr1:81777586-81777925 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 47

Conread position: 17-600
Cow position: chr1:85779292-85778681 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 247

Conread position: 17-601
Cow position: chr1:26517735-26517114 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 350

Conread position: 17-601
Cow position: chr1:99914578-99915210 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 383

Conread position: 17-632
Cow position: chr1:62243493-62242836 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 52

Conread position: 17-632
Cow position: chr1:76750814-76750155 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 17-643
Cow position: chr1:3934106-3933432 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 350

Conread position: 17-643
Cow position: chr1:28874233-28874896 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 235

Conread position: 17-643
Cow position: chr1:30533869-30533194 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 348

Conread position: 17-643
Cow position: chr1:32566770-32566103 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 200

Conread position: 17-643
Cow position: chr1:33552079-33552765 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 354

Conread position: 17-643
Cow position: chr1:62805019-62804351 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 248

Conread position: 17-643
Cow position: chr1:69404158-69404828 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 251

Conread position: 17-643
Cow position: chr1:72185730-72185048 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 351

Conread position: 17-643
Cow position: chr1:82923002-82922336 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 305

Conread position: 17-643
Cow position: chr1:91891969-91891293 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 351

Conread position: 17-643
Cow position: chr1:93855668-93856340 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 252

Conread position: 17-643
Cow position: chr1:102433889-102433206 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 17-644
Cow position: chr1:79455802-79455127 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 211

Conread position: 18-564
Cow position: chr1:40575369-40575938 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 147

Conread position: 18-632
Cow position: chr1:72081929-72082573 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 274

Conread position: 18-638
Cow position: chr1:33713222-33713904 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 343

Conread position: 18-642
Cow position: chr1:39544945-39545612 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 143

Conread position: 19-643
Cow position: chr1:5503122-5503791 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 317

Conread position: 20-537
Cow position: chr1:78923398-78923921 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 33

Conread position: 53-336
Cow position: chr1:85668001-85667728 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 109, 16

Conread position: 53-601
Cow position: chr1:81927442-81926900 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 370
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 115, 16

Conread position: 65-215
Cow position: chr1:27541931-27542083 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 5

Conread position: 67-269
Cow position: chr1:57569177-57569399 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 67-305
Cow position: chr1:11860034-11859784 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 238

Conread position: 67-545
Cow position: chr1:86595283-86594783 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 140

Conread position: 67-601
Cow position: chr1:17940563-17939996 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 294

Conread position: 67-602
Cow position: chr1:18241007-18240457 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 236

Conread position: 67-602
Cow position: chr1:98658698-98658146 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 80

Conread position: 67-642
Cow position: chr1:82477185-82477804 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 295

Conread position: 67-643
Cow position: chr1:56143124-56142530 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 281

Conread position: 68-578
Cow position: chr1:38419884-38420388 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 179

Conread position: 69-325
Cow position: chr1:44972530-44972796 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 69-387
Cow position: chr1:59934599-59934948 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 22

Conread position: 69-387
Cow position: chr1:86611349-86611679 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 65

Conread position: 69-423
Cow position: chr1:67292841-67293206 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 61

Conread position: 69-465
Cow position: chr1:5356339-5356759 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 290

Conread position: 69-502
Cow position: chr1:20525690-20526148 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 293

Conread position: 69-525
Cow position: chr1:32909040-32909498 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 50

Conread position: 69-570
Cow position: chr1:4209419-4209952 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 293

Conread position: 69-575
Cow position: chr1:58177900-58177383 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 69-585
Cow position: chr1:38417350-38417879 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 134

Conread position: 69-601
Cow position: chr1:79111700-79112226 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 248

Conread position: 69-601
Cow position: chr1:91529428-91528886 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 54

Conread position: 69-632
Cow position: chr1:53199756-53200360 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 69-642
Cow position: chr1:20830104-20830722 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 292

Conread position: 69-642
Cow position: chr1:77922918-77923536 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 291

Conread position: 69-643
Cow position: chr1:63604559-63603943 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 289

Conread position: 69-643
Cow position: chr1:65387533-65388140 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 289

Conread position: 69-643
Cow position: chr1:94660887-94661497 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 190

Conread position: 69-644
Cow position: chr1:29363511-29364123 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 81

Conread position: 69-644
Cow position: chr1:43570173-43569607 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 99

Conread position: 71-601
Cow position: chr1:55275818-55275256 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 289

Conread position: 72-642
Cow position: chr1:29412941-29412375 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 85

Conread position: 73-312
Cow position: chr1:30519815-30520070 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 42

Conread position: 73-423
Cow position: chr1:18193111-18193484 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 73-430
Cow position: chr1:66486938-66487312 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 19

Conread position: 73-514
Cow position: chr1:30063582-30064060 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 106, 40

Conread position: 73-563
Cow position: chr1:77110848-77110357 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 323
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 39

Conread position: 73-564
Cow position: chr1:89733275-89732784 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 73-587
Cow position: chr1:85532144-85531604 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 73-598
Cow position: chr1:34693899-34694458 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 62

Conread position: 73-599
Cow position: chr1:51965493-51966050 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 73-601
Cow position: chr1:8826262-8826829 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 267

Conread position: 73-601
Cow position: chr1:17035370-17034820 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 73-601
Cow position: chr1:21088648-21089206 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 288

Conread position: 73-601
Cow position: chr1:46836837-46837399 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 32

Conread position: 73-601
Cow position: chr1:76703065-76702559 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 73-601
Cow position: chr1:81288350-81288910 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 73-601
Cow position: chr1:85792896-85793456 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 289

Conread position: 73-601
Cow position: chr1:86546920-86546362 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 294

Conread position: 73-601
Cow position: chr1:91900241-91900797 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 247

Conread position: 73-602
Cow position: chr1:99315462-99315983 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 21

Conread position: 73-603
Cow position: chr1:24443146-24442583 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 136

Conread position: 73-619
Cow position: chr1:22905991-22906542 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 48

Conread position: 73-632
Cow position: chr1:40683525-40682925 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 89

Conread position: 73-642
Cow position: chr1:9259700-9260313 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 289

Conread position: 73-642
Cow position: chr1:17011517-17010910 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 286

Conread position: 73-642
Cow position: chr1:33897475-33898088 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 20

Conread position: 73-642
Cow position: chr1:57423617-57423004 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 289

Conread position: 73-642
Cow position: chr1:67833914-67833305 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 308

Conread position: 73-642
Cow position: chr1:69767795-69768407 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 289

Conread position: 73-643
Cow position: chr1:3384727-3384111 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 73-643
Cow position: chr1:24652495-24653092 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 59

Conread position: 73-643
Cow position: chr1:52358042-52357431 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 183

Conread position: 74-408
Cow position: chr1:57972487-57972142 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 10

Conread position: 74-514
Cow position: chr1:24206438-24206034 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 289
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 342, 8

Conread position: 74-601
Cow position: chr1:73069848-73069285 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 74-642
Cow position: chr1:33852494-33853097 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 279

Conread position: 74-643
Cow position: chr1:55155781-55155195 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 106

Conread position: 76-501
Cow position: chr1:29976330-29975932 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 289
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 53

Conread position: 76-643
Cow position: chr1:88131994-88132604 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 303

Conread position: 77-434
Cow position: chr1:57696939-57696572 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 19, 188

Conread position: 78-514
Cow position: chr1:53364796-53365218 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 78-575
Cow position: chr1:40511795-40511274 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 268

Conread position: 78-643
Cow position: chr1:25551184-25551798 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 221

Conread position: 79-378
Cow position: chr1:91446685-91446980 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 133, 50

Conread position: 79-642
Cow position: chr1:40056325-40056932 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 86-599
Cow position: chr1:91597477-91596939 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 349
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 30, 170

Conread position: 89-601
Cow position: chr1:76620230-76619704 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 104

Conread position: 93-474
Cow position: chr1:7141403-7141001 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 270
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 228

Conread position: 96-495
Cow position: chr1:93235939-93236353 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 164

Conread position: 96-601
Cow position: chr1:89494973-89494455 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 168

Conread position: 96-637
Cow position: chr1:88387495-88388038 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 86

Conread position: 99-643
Cow position: chr1:22619407-22618845 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 108-609
Cow position: chr1:61590929-61590408 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 11

Conread position: 123-423
Cow position: chr1:77613708-77614001 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 47

Conread position: 123-586
Cow position: chr1:72945038-72945493 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 311
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 59

Conread position: 126-601
Cow position: chr1:34683184-34683673 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 318
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 81

Conread position: 130-601
Cow position: chr1:87969598-87970083 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 219

Conread position: 137-641
Cow position: chr1:12060906-12060381 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 72

Conread position: 141-637
Cow position: chr1:18026464-18025923 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 57

Conread position: 151-644
Cow position: chr1:74285376-74284851 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 200

Conread position: 153-502
Cow position: chr1:5319689-5320042 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 102

Conread position: 153-642
Cow position: chr1:10723890-10724406 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 119

Conread position: 156-599
Cow position: chr1:34912283-34912746 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 146

Conread position: 157-501
Cow position: chr1:80445463-80445819 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 192

Conread position: 157-601
Cow position: chr1:26584412-26584874 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 192

Conread position: 157-604
Cow position: chr1:9379203-9378740 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 28

Conread position: 157-642
Cow position: chr1:67002470-67002981 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 189

Conread position: 157-643
Cow position: chr1:30074187-30074698 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 89

Conread position: 157-643
Cow position: chr1:59207763-59207251 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 188

Conread position: 158-601
Cow position: chr1:71561432-71560970 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 191

Conread position: 159-643
Cow position: chr1:49972855-49972345 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 23

Conread position: 161-598
Cow position: chr1:50988953-50988525 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 293
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 232, 70

Conread position: 162-410
Cow position: chr1:45018319-45018067 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 98

Conread position: 163-583
Cow position: chr1:51978503-51978909 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 278
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 214, 68

Conread position: 163-601
Cow position: chr1:67909871-67910322 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 177

Conread position: 164-601
Cow position: chr1:50941962-50941521 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 290
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 51, 138

Conread position: 164-643
Cow position: chr1:55777910-55778414 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 30

Conread position: 165-580
Cow position: chr1:31402122-31401720 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 70

Conread position: 167-643
Cow position: chr1:55320750-55320262 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 178

Conread position: 167-644
Cow position: chr1:81862660-81862155 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 169-642
Cow position: chr1:50210518-50210014 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 180

Conread position: 171-477
Cow position: chr1:21998090-21997773 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 167

Conread position: 174-602
Cow position: chr1:53563353-53563770 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 287
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 114, 11

Conread position: 176-361
Cow position: chr1:91079558-91079370 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 167

Conread position: 179-475
Cow position: chr1:67316148-67316430 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 28

Conread position: 179-602
Cow position: chr1:23091990-23092408 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 6

Conread position: 181-643
Cow position: chr1:57365006-57364515 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 186-579
Cow position: chr1:52939444-52939839 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 24

Conread position: 187-642
Cow position: chr1:76095719-76095265 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 188-643
Cow position: chr1:31193192-31192746 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 313
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 21

Conread position: 189-642
Cow position: chr1:101794644-101795073 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 307
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 239, 30

Conread position: 192-580
Cow position: chr1:22345352-22345751 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 106

Conread position: 194-504
Cow position: chr1:77115310-77114992 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 9

Conread position: 194-600
Cow position: chr1:71740787-71740369 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 274
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 32, 149

Conread position: 197-564
Cow position: chr1:50248343-50247972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 197-599
Cow position: chr1:40748885-40748493 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 122

Conread position: 197-643
Cow position: chr1:90607526-90607037 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 152

Conread position: 198-601
Cow position: chr1:61541653-61542050 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 126

Conread position: 208-632
Cow position: chr1:89769169-89768725 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 124

Conread position: 215-601
Cow position: chr1:21116466-21116062 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 126

Conread position: 216-384
Cow position: chr1:84152282-84152448 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 59

Conread position: 216-601
Cow position: chr1:57746019-57745621 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 216-601
Cow position: chr1:88268708-88268323 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 216-631
Cow position: chr1:29035679-29036114 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 82

Conread position: 216-643
Cow position: chr1:48248285-48248731 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 88

Conread position: 216-644
Cow position: chr1:34507803-34508237 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 289
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 174, 140

Conread position: 235-541
Cow position: chr1:27187698-27188000 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 185, 60

Conread position: 241-392
Cow position: chr1:30282405-30282257 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 241-601
Cow position: chr1:69416878-69416520 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 40, 45

Conread position: 241-601
Cow position: chr1:82565517-82565888 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 10

Conread position: 241-643
Cow position: chr1:86508506-86508077 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 102

Conread position: 245-601
Cow position: chr1:33350987-33351344 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 172, 78

Conread position: 256-444
Cow position: chr1:101013051-101012857 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 84

Conread position: 256-601
Cow position: chr1:82367194-82367535 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 137, 86

Conread position: 259-472
Cow position: chr1:2180756-2180968 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 156, 32

Conread position: 272-643
Cow position: chr1:25053728-25054115 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 70

Conread position: 277-554
Cow position: chr1:11859318-11859035 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 128, 30

Conread position: 280-601
Cow position: chr1:1828862-1828535 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 15

Conread position: 284-601
Cow position: chr1:72137440-72137762 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 54

Conread position: 285-638
Cow position: chr1:76741783-76741428 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 31

Conread position: 290-599
Cow position: chr1:98786391-98786710 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 23, 49

Conread position: 300-601
Cow position: chr1:29607600-29607289 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 89, 46

Conread position: 300-642
Cow position: chr1:21592052-21592416 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 42

Conread position: 313-601
Cow position: chr1:18964894-18964593 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 29

Conread position: 318-603
Cow position: chr1:30520271-30520566 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 133

Conread position: 323-601
Cow position: chr1:39107070-39107353 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 37

Conread position: 332-601
Cow position: chr1:73020434-73020160 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 42

Conread position: 336-601
Cow position: chr1:27112934-27112661 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 12

Conread position: 336-643
Cow position: chr1:77105521-77105199 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 24

Conread position: 351-641
Cow position: chr1:57569351-57569656 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 5

Conread position: 361-595
Cow position: chr1:40436296-40436053 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 362-602
Cow position: chr1:72112529-72112782 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 206

Conread position: 368-599
Cow position: chr1:38386902-38386666 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 21

Conread position: 378-642
Cow position: chr1:30282308-30282013 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 9

Conread position: 383-601
Cow position: chr1:45003746-45003969 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 25, 14

Conread position: 383-601
Cow position: chr1:102550056-102550270 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 11

Conread position: 389-539
Cow position: chr1:65021251-65021091 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 396-601
Cow position: chr1:40966857-40966642 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 396-643
Cow position: chr1:26813512-26813245 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 399-603
Cow position: chr1:57972033-57971817 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 403-608
Cow position: chr1:62921126-62921341 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 419-642
Cow position: chr1:82911243-82911001 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 419-643
Cow position: chr1:58338426-58338668 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 420-638
Cow position: chr1:89482537-89482771 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 156

Conread position: 425-643
Cow position: chr1:72037958-72037726 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 102

Conread position: 428-637
Cow position: chr1:18194105-18194332 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 432-601
Cow position: chr1:57696353-57696177 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 34

Conread position: 433-643
Cow position: chr1:6198698-6198465 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 435-642
Cow position: chr1:101012582-101012357 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 215

Conread position: 438-643
Cow position: chr1:98617184-98616961 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 444-601
Cow position: chr1:19184710-19184540 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 450-601
Cow position: chr1:87435863-87436021 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 459-642
Cow position: chr1:5355310-5355108 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 462-601
Cow position: chr1:38476937-38477083 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.