Cow genome map
| Conread name: | Ss1.1-rspc033_l13.5 |
| Conread position: | 1-642 |
| Cow position: | chr10:54931043-54930374 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 308 |
| Conread position: | 7-271 |
| Cow position: | chr10:27664099-27663811 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 7-379 |
| Cow position: | chr10:14862846-14863217 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 79 |
| Conread position: | 7-418 |
| Cow position: | chr10:14842948-14843362 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 7-599 |
| Cow position: | chr10:39878266-39877626 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 374 |
| Conread position: | 7-599 |
| Cow position: | chr10:40641125-40641738 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 11-410 |
| Cow position: | chr10:19512747-19513172 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 375 |
| Conread position: | 12-164 |
| Cow position: | chr10:6405-6562 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-362 |
| Cow position: | chr10:40151085-40150723 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 247 |
| Conread position: | 14-504 |
| Cow position: | chr10:39180968-39181489 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 354 |
| Conread position: | 15-601 |
| Cow position: | chr10:17433527-17434147 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 392 |
| Conread position: | 16-165 |
| Cow position: | chr10:42752305-42752468 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 16-325 |
| Cow position: | chr10:51774034-51773706 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 249 |
| Conread position: | 16-385 |
| Cow position: | chr10:36469276-36468899 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 16-504 |
| Cow position: | chr10:20382838-20382342 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 16-514 |
| Cow position: | chr10:24976599-24976104 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 16-573 |
| Cow position: | chr10:11821917-11822517 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 354 |
| Conread position: | 16-601 |
| Cow position: | chr10:39778938-39778335 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 319 |
| Conread position: | 16-601 |
| Cow position: | chr10:55094442-55095062 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 17-260 |
| Cow position: | chr10:16926705-16926979 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 17-271 |
| Cow position: | chr10:29109967-29109702 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 17-392 |
| Cow position: | chr10:126460-126859 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 17-601 |
| Cow position: | chr10:38849463-38850063 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 294 |
| Conread position: | 17-601 |
| Cow position: | chr10:57988819-57988198 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 356 |
| Conread position: | 17-602 |
| Cow position: | chr10:7280930-7280307 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 126 |
| Conread position: | 17-643 |
| Cow position: | chr10:14334673-14333996 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 365 |
| Conread position: | 17-643 |
| Cow position: | chr10:30684321-30683641 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 372 |
| Conread position: | 17-643 |
| Cow position: | chr10:38344184-38343516 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 350 |
| Conread position: | 17-644 |
| Cow position: | chr10:1378678-1379346 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 91 |
| Conread position: | 17-644 |
| Cow position: | chr10:29845472-29844808 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 246 |
| Conread position: | 18-445 |
| Cow position: | chr10:42641766-42642203 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 199 |
| Conread position: | 18-564 |
| Cow position: | chr10:21078807-21079372 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 18-578 |
| Cow position: | chr10:37307772-37308346 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 362 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 18-601 |
| Cow position: | chr10:20369901-20369316 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 49-637 |
| Cow position: | chr10:29109755-29109141 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 152 |
| Conread position: | 65-601 |
| Cow position: | chr10:22677199-22677732 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 65-601 |
| Cow position: | chr10:31524998-31525525 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 118 |
| Conread position: | 67-418 |
| Cow position: | chr10:21399447-21399079 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 67-601 |
| Cow position: | chr10:29011421-29010873 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 184 |
| Conread position: | 67-601 |
| Cow position: | chr10:33870516-33871082 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 295 |
| Conread position: | 67-642 |
| Cow position: | chr10:28256185-28255558 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 295 |
| Conread position: | 69-314 |
| Cow position: | chr10:1665298-1665034 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 239 |
| Conread position: | 69-337 |
| Cow position: | chr10:64146162-64146447 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 235 |
| Conread position: | 69-423 |
| Cow position: | chr10:28642770-28643149 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 293 |
| Conread position: | 69-496 |
| Cow position: | chr10:62585424-62585862 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 69-514 |
| Cow position: | chr10:7319602-7319161 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 291 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 69-514 |
| Cow position: | chr10:38722356-38722794 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 69-569 |
| Cow position: | chr10:10583350-10583886 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 298 |
| Conread position: | 69-594 |
| Cow position: | chr10:21898853-21898340 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 69-599 |
| Cow position: | chr10:51782177-51781646 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 25 |
| Conread position: | 69-599 |
| Cow position: | chr10:53485978-53485447 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 69-605 |
| Cow position: | chr10:7897249-7896680 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 311 |
| Conread position: | 69-642 |
| Cow position: | chr10:57556102-57555485 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 293 |
| Conread position: | 69-643 |
| Cow position: | chr10:21739514-21738906 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 189 |
| Conread position: | 69-644 |
| Cow position: | chr10:19840916-19841529 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 286 |
| Conread position: | 70-577 |
| Cow position: | chr10:60361132-60361647 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 207 |
| Conread position: | 70-638 |
| Cow position: | chr10:48397864-48397274 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 240 |
| Conread position: | 72-538 |
| Cow position: | chr10:35225197-35224727 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 74, 128 |
| Conread position: | 72-601 |
| Cow position: | chr10:64221166-64220655 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 73-291 |
| Cow position: | chr10:55285199-55285434 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 70, 185 |
| Conread position: | 73-308 |
| Cow position: | chr10:38544688-38544444 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 211 |
| Conread position: | 73-321 |
| Cow position: | chr10:32701965-32702228 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 66, 241 |
| Conread position: | 73-385 |
| Cow position: | chr10:11684394-11684061 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 198 |
| Conread position: | 73-407 |
| Cow position: | chr10:32429968-32430307 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 93, 77 |
| Conread position: | 73-422 |
| Cow position: | chr10:20375595-20375237 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 236 |
| Conread position: | 73-426 |
| Cow position: | chr10:58597610-58597962 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 73-433 |
| Cow position: | chr10:28530212-28529864 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 137 |
| Conread position: | 73-482 |
| Cow position: | chr10:57502047-57502472 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 73-504 |
| Cow position: | chr10:24311126-24310697 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 73-504 |
| Cow position: | chr10:53321157-53320710 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 294 |
| Conread position: | 73-573 |
| Cow position: | chr10:22575897-22575392 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 73-599 |
| Cow position: | chr10:28946722-28947254 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 73-599 |
| Cow position: | chr10:29722807-29722257 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 73-600 |
| Cow position: | chr10:16477999-16478535 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 73-600 |
| Cow position: | chr10:21488203-21488752 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 278 |
| Conread position: | 73-600 |
| Cow position: | chr10:24784867-24784335 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 182 |
| Conread position: | 73-601 |
| Cow position: | chr10:37771123-37771681 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 284 |
| Conread position: | 73-601 |
| Cow position: | chr10:47908171-47908724 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 311 |
| Conread position: | 73-601 |
| Cow position: | chr10:62407540-62406985 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 285 |
| Conread position: | 73-603 |
| Cow position: | chr10:19495051-19494488 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 73-631 |
| Cow position: | chr10:14805083-14805681 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 289 |
| Conread position: | 73-632 |
| Cow position: | chr10:41158684-41159252 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 144 |
| Conread position: | 73-642 |
| Cow position: | chr10:39815161-39814549 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 73-642 |
| Cow position: | chr10:41878160-41878774 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 290 |
| Conread position: | 73-643 |
| Cow position: | chr10:22102474-22103082 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 251 |
| Conread position: | 73-643 |
| Cow position: | chr10:29631561-29630945 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 274 |
| Conread position: | 73-643 |
| Cow position: | chr10:39040058-39039466 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 243 |
| Conread position: | 74-352 |
| Cow position: | chr10:42111659-42111952 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 74-475 |
| Cow position: | chr10:21637863-21637471 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 38 |
| Conread position: | 74-514 |
| Cow position: | chr10:58812513-58812062 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 74-600 |
| Cow position: | chr10:44708373-44707821 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 306 |
| Conread position: | 74-602 |
| Cow position: | chr10:41387708-41387187 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 74-642 |
| Cow position: | chr10:41568339-41568951 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 288 |
| Conread position: | 75-490 |
| Cow position: | chr10:50135812-50136239 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 279 |
| Conread position: | 76-388 |
| Cow position: | chr10:44262590-44262275 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 76-462 |
| Cow position: | chr10:40398239-40398639 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 67, 220 |
| Conread position: | 76-581 |
| Cow position: | chr10:58096785-58096275 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 346 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 204 |
| Conread position: | 77-588 |
| Cow position: | chr10:47787930-47788449 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 78-354 |
| Cow position: | chr10:28148957-28148678 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 79-344 |
| Cow position: | chr10:20118373-20118098 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 89-334 |
| Cow position: | chr10:6538640-6538912 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 89-597 |
| Cow position: | chr10:69510997-69510507 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 331 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 96-310 |
| Cow position: | chr10:8326072-8325874 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 129, 46 |
| Conread position: | 97-602 |
| Cow position: | chr10:22583748-22583255 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 123-601 |
| Cow position: | chr10:29101430-29100929 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 123-601 |
| Cow position: | chr10:41774319-41773820 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 330 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 23, 164 |
| Conread position: | 156-644 |
| Cow position: | chr10:46196407-46196898 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 335 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 157-642 |
| Cow position: | chr10:10172068-10172585 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 193 |
| Conread position: | 157-642 |
| Cow position: | chr10:25652095-25651579 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 192 |
| Conread position: | 158-575 |
| Cow position: | chr10:44102476-44102908 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 227, 198 |
| Conread position: | 158-631 |
| Cow position: | chr10:68160301-68159802 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 108 |
| Conread position: | 161-504 |
| Cow position: | chr10:40462423-40462766 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 163-601 |
| Cow position: | chr10:32317123-32317569 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 170-642 |
| Cow position: | chr10:21517618-21517164 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 21 |
| Conread position: | 171-601 |
| Cow position: | chr10:14853211-14853648 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 54, 118 |
| Conread position: | 171-616 |
| Cow position: | chr10:2119653-2119198 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 174-643 |
| Cow position: | chr10:8291399-8291890 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 179-578 |
| Cow position: | chr10:19706280-19705852 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 181-599 |
| Cow position: | chr10:22346320-22346754 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 182 |
| Conread position: | 187-585 |
| Cow position: | chr10:58376933-58376533 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 197-600 |
| Cow position: | chr10:56394649-56394240 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 198-354 |
| Cow position: | chr10:37491286-37491131 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 199-580 |
| Cow position: | chr10:20537752-20538126 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 24 |
| Conread position: | 199-603 |
| Cow position: | chr10:41634795-41635190 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 203-463 |
| Cow position: | chr10:50614924-50615180 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 179, 11 |
| Conread position: | 220-614 |
| Cow position: | chr10:39439554-39439962 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 223-642 |
| Cow position: | chr10:25339512-25339946 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 122 |
| Conread position: | 244-602 |
| Cow position: | chr10:10242369-10242730 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 256-434 |
| Cow position: | chr10:36512022-36512200 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 256-643 |
| Cow position: | chr10:16927103-16927520 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 261-593 |
| Cow position: | chr10:22909018-22908676 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 77 |
| Conread position: | 276-608 |
| Cow position: | chr10:38544430-38544095 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 71 |
| Conread position: | 287-489 |
| Cow position: | chr10:5256594-5256387 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 103, 55 |
| Conread position: | 295-571 |
| Cow position: | chr10:39444801-39444512 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 303-643 |
| Cow position: | chr10:8325615-8325263 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 202, 39 |
| Conread position: | 308-638 |
| Cow position: | chr10:22644493-22644843 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 324-643 |
| Cow position: | chr10:23409731-23409400 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 18 |
| Conread position: | 327-643 |
| Cow position: | chr10:32702267-32702606 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 336-564 |
| Cow position: | chr10:46183965-46184191 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 342-601 |
| Cow position: | chr10:31539656-31539926 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 227 |
| Conread position: | 342-643 |
| Cow position: | chr10:41151209-41150885 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 350-566 |
| Cow position: | chr10:19513151-19513369 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 350-642 |
| Cow position: | chr10:19143083-19142767 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 355-603 |
| Cow position: | chr10:42114062-42114310 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 82 |
| Conread position: | 356-600 |
| Cow position: | chr10:58598051-58598308 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 365-642 |
| Cow position: | chr10:40150638-40150348 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 388-601 |
| Cow position: | chr10:29732315-29732536 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 144 |
| Conread position: | 389-644 |
| Cow position: | chr10:22343052-22343314 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 392-642 |
| Cow position: | chr10:22619505-22619242 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 396-642 |
| Cow position: | chr10:34666160-34665891 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 397-637 |
| Cow position: | chr10:20515016-20515274 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 399-643 |
| Cow position: | chr10:32828458-32828722 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 404-504 |
| Cow position: | chr10:1664983-1664880 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 421-571 |
| Cow position: | chr10:20374955-20374798 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 424-642 |
| Cow position: | chr10:6556146-6556382 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 426-588 |
| Cow position: | chr10:36512424-36512595 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 435-601 |
| Cow position: | chr10:14844382-14844555 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 439-601 |
| Cow position: | chr10:53981520-53981682 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 450-643 |
| Cow position: | chr10:39209391-39209599 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 452-601 |
| Cow position: | chr10:48375974-48375819 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 502-601 |
| Cow position: | chr10:21451116-21451215 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.